Cellvibrio sp. KY-GH-1: D0C16_19435
Help
Entry
D0C16_19435 CDS
T06422
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0C16_19435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ceg02022
]
D0C16_19435
02035 Bacterial motility proteins [BR:
ceg02035
]
D0C16_19435
Two-component system [BR:
ceg02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D0C16_19435
Bacterial motility proteins [BR:
ceg02035
]
Pilus system
Twitching motility proteins
D0C16_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
Pre_tape_measure
VpsR
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QEY17970
LinkDB
All DBs
Position
complement(4543188..4544594)
Genome browser
AA seq
468 aa
AA seq
DB search
MSAKRALIIDDEPDIRELLEITLGRMQIDTQSAAGIQHAKQLLSENTYDLCLTDMRLPDG
NGLEIVEYIQQRQPQLPVAVITAHGSIDTAIESMKAGAFDFISKPVDLATLRKLVNTAIE
SSQLTPQPVPKLTPIIGESKAIQELIRSIEKLARSQAPVYISGESGSGKELVAHSIHDLG
PRANKPFIAVNCGAIPRELMESEFFGHKKGSFTGAHQDKVGLFQAAEGGTLFFDEVADLP
LDMQVKLLRAIQEKSVRPIGAAEEVATDVRILCATHKHLETEVKEGRFRQDLFYRLNVIQ
LAVAPLRERREDITLLTQHLLNKLATEIGLPAPKLSPRAQQSLASYHFPGNVRELENILE
RAFTLCEANVIDADDLQLRDTPAPESYEKTYVSTSNKANVRSNNSIVDYPARCAEYPSLD
DYLQDVEKEILCNALEQARWNKTLAAKHLGISFRSLRYRLQKLGLDDE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaacgcgcgctgattatcgatgacgaaccagacattcgtgaactcttggaa
attaccttggggcgaatgcaaatcgatacccaaagtgctgcaggaatccagcacgcaaaa
caactactatccgaaaatacttatgacttatgtctgactgacatgcggctgcccgatggc
aatggactggaaatcgtcgaatatatccaacaacggcaaccgcaacttcccgttgcggta
atcactgcccatggaagtatcgacacagcgatcgaatcgatgaaagcaggagcatttgac
tttatctccaaaccggtagatttggccacattgcgcaaactagtgaacaccgccatagag
tcaagtcaattaacaccgcaacccgttcccaaactaacgccgattattggcgaatcaaag
gccattcaagagttaatccgaagtattgaaaaattggcgcgttcacaagccccggtttat
atcagcggagaatcagggtcgggcaaggaacttgtcgcccattccattcacgacctgggg
ccgcgcgcaaacaaaccttttattgccgttaactgtggagcaattccacgtgagctgatg
gaaagcgaattttttggccataagaaagggagctttaccggtgcccatcaggacaaagtg
ggactatttcaagctgctgagggcggcactttgttttttgatgaagtcgcagatttaccg
ctcgatatgcaagttaaattattgcgcgcaattcaggaaaaatcagttcgcccgattggc
gcagccgaagaagttgccactgatgtgcggattttatgtgcaactcacaaacatttggaa
actgaagtaaaagaagggcgcttccggcaagatcttttttatcgtttaaatgtaattcaa
ctagctgttgccccattacgagaacgccgggaagatattactctattaactcagcatttg
ttaaataagctcgccacggaaattggtttacccgcaccaaaactatcaccacgagcgcaa
caatcattggcgagctatcattttcctggcaatgtacgcgaattggaaaatattcttgag
cgcgccttcacactctgtgaagccaacgtaattgatgcagacgatttgcagctgcgcgac
acgccggctccagaatcctatgaaaaaacctatgtcagcaccagtaataaagcaaatgtt
cgcagcaataacagtatcgtcgattatcccgcccgctgtgcggagtacccttctctcgac
gattacctgcaagatgtagaaaaagaaattttatgcaacgcgctcgaacaagccagatgg
aataaaacattggcagcaaaacacttggggattagctttagatctttaagatacaggctg
caaaaacttggacttgatgatgaataa
DBGET
integrated database retrieval system
