Cellvibrio sp. KY-GH-1: D0C16_19795
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Entry
D0C16_19795 CDS
T06422
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0C16_19795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceg03021
]
D0C16_19795
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_19795
Enzymes [BR:
ceg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0C16_19795
Transcription machinery [BR:
ceg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0C16_19795
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0C16_19795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QEY18029
UniProt:
A0A5J6PG63
LinkDB
All DBs
Position
4604813..4605799
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AA seq
328 aa
AA seq
DB search
MQTAVNEFLTPRHIDVTENGPTRARVVLEPLERGFGHTLGNALRRILLSSMAGCAIVEAE
IEGVLHEYSAIEGVREDVIEILLNLKGVAVIMHGKDHAVLTLTKKGPGVVTAADIQVDHD
VEIKNPDHVIANITGNTELKMRLTIARGRGYQPADSRRRDDDESRAIGRLQLDASFSPVK
RLAYSVESARVEQRTDLDKLILDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGEKQSA
PEQKEEAIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLRND
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgcagtaaacgaatttttaactccgcgtcatatcgatgtaacagaaaatggc
ccaacacgcgcgcgcgtcgtattggaaccattagaacgtggtttcggacatactttaggc
aatgcattgcgtcgtattctgctttcttcaatggccggttgcgccattgttgaagcggaa
atcgaaggtgtgctgcatgagtacagtgctattgaaggtgtacgtgaggatgtaattgaa
atcctgctgaacctcaaaggtgttgcagttatcatgcacggtaaggatcatgctgttctt
accttgaccaaaaaaggtccaggtgttgttaccgctgctgatattcaggttgatcacgat
gtggaaatcaaaaatccagatcacgtgattgctaatatcactggcaacaccgaattgaaa
atgcgtttaaccattgctcgcggtcgtggctatcagcctgctgacagtcgtcgtcgcgat
gatgatgagagccgtgcaattggacgtttgcaactggatgcgtccttcagcccagttaag
cgcttggcttacagtgttgaaagtgctcgtgtagagcaacgcactgacttggataagctt
attcttgatctcgagaccaacggcactattgatcctgaagaggctatccgtcgtgcggcc
accattctgcaacagcaattggcggtgtttgttgatcttgaaggtgagaagcaatctgct
cctgagcaaaaagaagaggctattgacccgattctgttgcgtccggtagatgatttggag
cttactgttcgctcagcaaactgcctgaaagcagagaatatttattacattggtgatcta
attcagcgcactgaagtggagctgttaaagacaccaaacctaggtaaaaaatcattgacc
gaaattaaagatgttctcgcgtcacgtggtttgtctttaggtatgcgtttggaaaactgg
cctccagctagtttgagaaacgactaa
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