Cellvibrio sp. KY-GH-1: D0C16_19805
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Entry
D0C16_19805 CDS
T06422
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D0C16_19805 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_19805 (uvrA)
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0C16_19805 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0C16_19805 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
AAA_23
RsgA_GTPase
T2SSE
AAA_22
DnaJ_CXXCXGXG
AAA_24
nSTAND3
cobW
MMR_HSR1
AAA_28
AAA_25
Viral_helicase1
BCA_ABC_TP_C
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QEY18031
UniProt:
A0A5J6PC67
LinkDB
All DBs
Position
complement(4606795..4609665)
Genome browser
AA seq
956 aa
AA seq
DB search
MDKIIVRGARTHNLKNIDLDIPRDKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHVEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGEPRC
PEHGAPLTAQTISEMVDTVLAMPEGTKLMLLAPIIRDRKGEHLHVFEQLKRDGFIRARID
GILCDLDDTPKLDKKKKHTVEVVIDRFKVREDLKLRLAESFETALNLSEGIACINYMDGE
APDRLFSSKHACPICDYSLSELEPRLFSFNNPAGACPTCDGLGVHQFFDEDKVIQDTALS
LSEGAIRGWDKRNVYYFHMLASLAKHYAFNVETPWSKLKAKQREAVLYGSGEEVIEFNYI
NDRGDVYKRSHTFEGVLPNMERRYRDTESSSVRDDLIKFLSTQPCPECEGTRLRIEARNV
FIDERPLPKITEMPVADAYDYYMKLSFKGRKAGIADKILKELRDRFRFLVDVGLNYLTLN
RSAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLKTLTHLRDIGNTV
IVVEHDEDAIRLADHVIDIGPGAGVHGGQVIAQGNVKAIMANKHSITGQYLSGTKEIAVP
AKRNPVNPKEMLRLIGAKGNNLQNVTLEIPVGLMTCVTGVSGSGKSTLINATLHPLAATE
LNGATTLDPAEYEEIQGLDLFDKCVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYQPGRFSFNVKGGRCEACQGDGVTKVEMHFLPDVYVPCDVCKGKRYNRETLDVKYK
NKNINEVLDMTVEDARDFFDAVPSIANKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA
KELSKRDTGKTLYILDEPTTGLHFYDIQQLLNVLHRLRDHGNTVVVIEHNLDVIKTADWI
VDLGPEGGSGGGQIIATGTPEEVAQLEYSHTGRFLKPMLKLLEAKKKPAKATKTKT
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaattattgtcaggggcgcacgtacccacaacctcaaaaatatcgacctggat
attccgcgcgacaagcttgtcgtgattaccggtccgtccggttcgggcaagtcctcactc
gcgttcgacactctgtatgctgaaggtcaacgacgctatgtggagtcgctctcgacttac
gcccgccagttcctatcaatgatggaaaaaccggatgtcgatcatgtagaaggtttgagc
ccggccatctcgatcgagcagaaatccacctcgcacaaccctcgttctaccgtgggcacc
attaccgagatctacgattacttgcgtttactctacgcccgtgtgggcgagccgcgctgt
ccggagcacggtgccccgctaacagcacaaaccattagtgagatggtggataccgttctg
gcaatgcccgaaggcaccaagctgatgctactggcaccaatcattcgcgatcgcaaaggc
gagcacctgcatgtgtttgagcagttgaagcgcgatggttttatccgtgcgcgcatcgat
ggcatcctgtgtgatcttgacgacacgcccaagctcgacaagaaaaagaaacacaccgtt
gaagtggtcatcgaccgttttaaagtgcgcgaggatttaaaactgcgcctcgccgaatcg
tttgaaactgcgttgaatttatcagaaggtattgcctgcattaactatatggatggcgaa
gcgccggatcgccttttctcctccaaacacgcctgccctatctgcgattacagcctgagc
gaactcgagccacgcctgttctcgtttaacaatcccgccggtgcctgcccaacgtgtgac
ggcttgggtgtgcatcagttttttgatgaagataaagtcattcaggacactgctctcagc
ctttctgaaggggccatccgcggttgggacaaacgcaacgtttactatttccatatgctg
gcgtcgcttgccaagcactatgcctttaacgtggagacaccttggtcgaaactcaaagcc
aagcaacgcgaagccgtgctctatggctcaggcgaagaagtgattgaatttaattacatc
aatgaccgcggtgatgtgtataaacgcagccatacctttgaaggtgtgctgcccaacatg
gagcggcgctatcgcgatactgaatccagttcagtgcgcgacgatttaattaaatttctc
tccacccagccgtgccccgaatgtgaaggcacgcgcctacgcattgaagcgcgcaatgtg
tttatcgatgaacgcccattacccaaaatcaccgaaatgccggtagctgatgcttacgac
tattacatgaagctaagctttaaaggtcgtaaagcgggcatcgccgataaaattcttaaa
gagttgcgcgatcgttttcgcttcctggtagacgtaggcctgaattacctcacacttaat
cgcagcgctgaaacattatccggtggcgaagcgcagcgtattcgacttgccagtcaaatc
ggtgcgggtcttgtgggcgttatgtatattctcgatgaaccttcgattggtttacatcag
cgcgataacgagcgcttgctgaaaacacttacccacttgcgcgatatcggcaacacagta
atcgtcgtcgagcatgatgaagatgcaattcgccttgcagatcacgtgattgatattggc
ccaggtgctggcgtgcacggcggccaggtgatcgcccagggtaatgttaaggccattatg
gcgaataagcattcgatcactggccaatatctcagtggcaccaaagaaattgccgtcccg
gctaaacgcaatccagttaacccaaaagaaatgttgcgcttgattggagctaaaggaaac
aacttacagaatgttaccctggaaattcctgtcggattaatgacctgcgtaaccggcgta
tctggctcgggaaaatcaacactgatcaatgcaacattgcatccgctagcggctacagaa
cttaatggcgcaaccacacttgatccagctgaatatgaagagattcaagggctggattta
tttgataaatgcgtggatatcgaccaaagcccaattggccgcacaccacgttcgaatccg
gcaacctacaccggaatattcacacccattcgcgagttatttgcgggcactcaggaatct
cgctcacgcggctatcaacccggccgctttagctttaacgtgaaggggggccgctgtgaa
gcttgccaaggcgatggcgtcaccaaagttgaaatgcactttctgcccgatgtgtatgta
ccctgcgatgtatgcaaaggcaaacggtacaaccgcgaaaccctggatgtaaaatacaaa
aacaaaaacattaatgaagtgctcgacatgacagtcgaagatgcgcgcgatttttttgat
gcagtcccatccattgccaacaaactacaaacattaatggacgtaggtttgtcgtatatt
cgtttagggcaatcagctactacattatccggtggtgaagcgcagcgggtaaaactagcg
aaggaattatcaaaacgcgatacaggcaagacactttatattctggatgaacctactacg
ggtctgcacttttacgatatccagcaattattaaacgttcttcataggcttcgtgatcac
ggtaatactgtagttgtgatcgagcacaatcttgacgtaattaaaacagcggattggatc
gttgatttggggccagaaggcggtagcggtggaggtcaaatcattgccaccggaacaccg
gaagaggtcgcccaactcgaatactctcacacaggtcgattccttaaacctatgttgaaa
ttattggaagctaaaaagaaacccgcgaaggcaaccaaaacgaaaacttga
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