Cellvibrio sp. KY-GH-1: D0C16_23025
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Entry
D0C16_23025 CDS
T06422
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D0C16_23025
09124 Replication and repair
03420 Nucleotide excision repair
D0C16_23025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceg03021
]
D0C16_23025
03036 Chromosome and associated proteins [BR:
ceg03036
]
D0C16_23025
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_23025
Enzymes [BR:
ceg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
D0C16_23025
Transcription machinery [BR:
ceg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D0C16_23025
Chromosome and associated proteins [BR:
ceg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
D0C16_23025
DNA repair and recombination proteins [BR:
ceg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D0C16_23025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
HBB
PhoH
Glyco_hydro_49N
Motif
Other DBs
NCBI-ProteinID:
QEY18605
UniProt:
A0A5J6PIQ4
LinkDB
All DBs
Position
complement(5466578..5468872)
Genome browser
AA seq
764 aa
AA seq
DB search
MSAGPNPVLATEKQKSVAVKTLVEFAAKTGSLDRRFTPAPTGQEGIEGHKKVTSRRGEGY
QTEMSLSISYNGITFRGRADGYDPAAHCIDEIKTFYGDVDRIPENHRALHWAQARCYGWM
YCALNGCDQVNLALIYFELATETEFLLEENWKASELQKYFELLAEKYCTWQTQLNQRRHQ
LQQWLEQLQFPYGEMHASQRVMAEAVYKAAATGRVVLAEAPTGTGKTLAALFPALKSIPR
TPVDKIFYLTAKTTGKQLALENIQLITSAAAAPLRTLELTAQEKACLEPDKKCRGDSCPY
ALDFYSKLEAARQAAFATPMLNKQALNKLADQFEICPFYLSLEMSRWVDIVVADVNYYFD
GTPLLLGLTNQFEWNPYLLVDESHNLIERGRSMYSAELNRAELLAAKKVAPAALKKPLEK
INKAWLSLLKKLTQVTDDFVRIEILPEKLGQALVEFTNSYSEFLQQNPEHSIQESIAQEF
FFAALNYQRIGDILDEDFCIDMQAIGSKAEIITLRNLIPAQQLAVRLSFAHSACFFSATL
HPSHYYQTLLGLPEDTVHIKVPSPFGAHQLKVKIAHHLSTRYKDRQAAIAPVCEIIQQQL
HEEPGNALVFFSSYEFLQQAEQQLRKRLAQQDIQLIVQSRRMSEQERENFIEQFNQHNNL
LGLAVLGGAFSEGVDLSGDALKGAFIATLGLPQVNPINEYLRGVLQEQFGQGYDFTYTYP
GIQKVIQAAGRVIRNQTDSGYLWLLDQRFGQSQIKALLPDWWNE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgggcctaatcctgtattggctacagagaaacaaaaatcagttgctgttaaa
accctggtggaatttgccgcaaaaaccggcagtctggatcggcgttttacccccgcgcca
acaggccaagaaggtattgaaggccacaaaaaagttacctccaggcgcggggaaggttac
caaaccgaaatgagtttaagcatcagctacaacggcatcacttttcgcggccgcgctgat
ggttacgaccccgccgcccactgcattgacgagataaaaacattttatggcgatgtggat
cgcattcccgagaatcatcgcgccctgcattgggcgcaagccagatgttatggctggatg
tactgtgcactcaatggttgcgaccaagtcaatttggcattgatttattttgagctggca
acagaaaccgaatttttgttggaagagaactggaaagccagtgaactgcaaaaatacttc
gaacttctagccgaaaaatactgcacatggcaaacgcaattgaaccagcgccgccatcaa
ttacagcaatggctggaacaactgcaatttccatacggagaaatgcatgcttcgcagcga
gtcatggcggaagccgtttataaagcggccgccactggtcgggtcgtattagcagaagcg
ccaaccggtaccggcaaaacccttgcagcactttttcctgctcttaaatccataccgcgc
acgccagtcgataaaattttttacctcactgcaaaaacaaccggcaaacaactagcactg
gaaaatatccaacttattaccagtgctgcagcagcaccattgcgcacattggagcttacg
gcccaggaaaaagcctgcctggagccggataaaaaatgccgtggcgattcctgcccctac
gcactggacttttacagcaaactggaggctgcacgacaggccgcttttgctaccccgatg
ttgaacaaacaagcactaaataaactcgctgatcaatttgaaatatgcccgttttatttg
agcttggagatgagccgctgggtagatatagtggtggccgatgtgaattactattttgat
ggcacaccattattattgggattaaccaatcaatttgaatggaacccttacctattagtg
gatgaaagccacaatttgattgaacgtgggcgcagcatgtacagcgccgaattgaatcgc
gccgagctgctcgccgccaaaaaagttgcacccgctgcgcttaaaaagccgctggaaaaa
attaacaaagcctggctatccctactaaaaaaactaacgcaagtaacagatgatttcgtc
cgaatagaaatattacccgaaaaactcgggcaagctctggtagagtttaccaatagctat
agcgaatttttacagcagaatccagagcattcaattcaggaatctattgcgcaagaattc
ttctttgccgcacttaattaccagcgaattggagacattcttgatgaagatttttgtata
gacatgcaggcaattggcagcaaagcggaaataatcacgctgcgcaatttaattcctgca
cagcagttagcagtacggctcagctttgcacacagtgcctgctttttttctgccaccctg
cacccaagccattattaccaaacactactgggattaccggaggacaccgtacacattaag
gttccatcaccatttggcgcgcatcaactcaaggtaaaaatcgcccatcacttatcgaca
cgctataaagatcgccaggcagcaatagcaccggtgtgcgaaatcatccagcaacaatta
cacgaagaaccgggtaatgcactggtgtttttttccagttatgaatttctgcagcaggca
gaacaacaactacgcaaacgtttggctcagcaagacatacaacttattgttcagtcgcga
cgcatgagcgaacaggaacgggaaaactttatcgagcagttcaatcaacacaataacctg
ttaggccttgcggtgttgggtggagcatttagcgagggcgttgatttgtccggcgatgcg
ctcaaaggcgcttttattgcaactttgggcttgccgcaagtaaatcccatcaacgaatat
ttgcgcggcgttttgcaagagcaatttggccaaggttatgattttacttacacctacccc
ggcatccaaaaagtgattcaagccgccggccgagtgattcgcaatcaaacagactccggt
tatttatggctgttggatcaacgattcggacaatcccaaattaaggcgctgctgcctgat
tggtggaatgagtaa
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integrated database retrieval system
