Celeribacter ethanolicus: CEW89_01950
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Entry
CEW89_01950 CDS
T05094
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW89_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceh03019
]
CEW89_01950
Enzymes [BR:
ceh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEW89_01950
Messenger RNA biogenesis [BR:
ceh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW89_01950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG46437
UniProt:
A0A291G8F2
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All DBs
Position
412165..413370
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AA seq
401 aa
AA seq
DB search
MTFNELGLNARMVSRLASLGLNTPTPIQQKAIPHALQGRDVLGIAQTGTGKTAAFGIPLV
VALSKSPERPAPRSVRGLVLAPTRELAGQIVQSLGGLTSDLRITLVVGGKSINAQAARLS
RGTDILVATPGRLIDLLDRRAVDLGQTRFLVLDEADQMLDIGFIHALRRIAPMLGKERQT
MMFSATMPKTMADLSREYLSEPVRVEASPPGKVADKVTHSVHFVTKEGKQDLLIGLLHGH
REDRALVFSRTKHGAERLMKQLDRAGFVTASIHGNKSQGQRDRALGAFRDGSVHVLVATD
VAARGIDIPGVGHVYNFDLPNVPENYVHRIGRTARAGRDGRAIAFCAADEVTELKAIEKV
LGMRVAVAGGRPWEATDETPKPQKRRRSRRRAGGRPERMVA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaatgaactcgggctgaatgcccgcatggtctcacggctggccagcctgggg
ctgaatacaccgacaccgatccagcaaaaggcgatcccgcatgcattgcaggggcgcgac
gtgctgggcatcgcccagaccgggaccggcaagaccgccgctttcggcatccccctggtg
gttgcgctgtccaagagcccggagcggccagcgccgcgatcggtccgcgggctggttctg
gccccgacgcgcgaactcgcgggtcagatcgtccagagccttggcggcctgacctcggat
ctccgcataacgctcgtcgttggtggcaagtcgatcaacgcgcaggccgcgaggctttcg
cgcgggaccgacatcctcgtggccaccccgggccgcttgatcgaccttctggaccgccgc
gcggtggacctgggccagacacggtttctcgtgttggacgaggccgaccagatgctcgat
atcggtttcattcatgccctgcgccgtatcgcgccgatgctcggcaaggagcgccagacc
atgatgttttcggccaccatgccgaaaacgatggccgatctgtcccgcgaatacctgagc
gagcccgtgcgcgtcgaggcctcgccgccgggcaaggtcgccgacaaggtgacccattcg
gtgcatttcgtcaccaaggaaggaaagcaggacctgctgatcggtcttctgcatgggcat
cgggaggaccgcgcactggtcttttcgcgcaccaagcatggcgcggaacggttgatgaag
cagctcgatcgtgccggtttcgtgaccgcctcgatccacggcaacaaaagccagggccaa
cgcgacagggcgctcggtgcgtttcgggacggatcggtgcatgtgctggtggcgacggat
gtcgcggcccgcgggatcgacattccgggcgtgggacatgtctacaatttcgaccttccg
aacgtgcccgagaactacgtgcaccggattggccggacggcccgtgccggtcgtgacggt
cgcgcgattgcgttctgtgccgccgatgaggtgacggagctcaaggccatcgaaaaggtg
cttggcatgcgcgtcgcggttgctggcggccgcccctgggaggccacggacgagacgccg
aagccgcagaagaggcggcggtcgcgccggcgcgctggcgggcgtccggagcggatggtt
gcatga
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