KEGG   Celeribacter ethanolicus: CEW89_05990
Entry
CEW89_05990       CDS       T05094                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ceh  Celeribacter ethanolicus
Pathway
ceh02020  Two-component system
ceh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ceh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CEW89_05990
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CEW89_05990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ceh03021]
    CEW89_05990
Transcription machinery [BR:ceh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CEW89_05990
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_23 HTH_Tnp_Tc3_2 HTH_Tnp_ISL3 DUF6471
Other DBs
NCBI-ProteinID: ATG47159
UniProt: A0A291G9Q3
LinkDB
Position
complement(1244016..1245335)
AA seq 439 aa
MTGLHLHQSTSQRLTQVMQRAIGLLQMDHAELAGLLIEEAAENPCLTLTLPQGDADSAAP
EPAGAERRSVPGPWRPAFLGSGDEIETLRAHADGLHAHVARQIGLIFRDTRAREIAMVFL
EHLEPSGWLGAPLEDIARQAGCPAAEAEAVLTRLYEVEPAGLFARSLSECLRLQLEEAGD
LTPPMARLLDALPLLAKGDTAALLARCEVDAEELAALVTRLRRLDPKPGAHFDDAPELRR
APDLIAERDELGQWHVELNAASAPRIAVTPVAGAEHRAALKEARWLERTVSRRNSLVLDV
AAHVLGVQYEALEQGPAYLNPLNCADVAANLGVHETTINRVRNGLLIQTPRGMMPLRAFF
ARGGAGHRDGSHVPAEAISARIAGLIAAERPDKPLTDQELATRLAEAGLRVSRRTVSNRR
RMAGFPGAAQRLTSKGREE
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaccgggcttcatctgcaccagagcacgtctcagcgcctcacacaggtgatgcagcgc
gccatcgggctgttgcagatggatcatgccgaactggccgggctgctgattgaagaggcg
gcggagaacccctgtctgacgctcaccctgccacagggcgatgcggacagcgccgccccc
gagcctgccggggcggagcgccggagcgtgcccggcccgtggcgcccggcgtttctcggc
agcggcgatgagatcgagacgctgcgggcgcatgccgacggcttacatgcgcatgtggca
cggcaaatcggcctgatctttcgcgacacgcgggcgcgggagatcgcgatggtctttctg
gagcatctggaacccagcggctggctcggtgcgccgctcgaagacattgcgcgacaggcc
gggtgtccggcagcagaggccgaggcggtgctcacccgtctgtatgaggtcgaacccgcg
ggcctgtttgcccgctctctctcggaatgcctgcgcttgcaactcgaagaggcgggcgat
ctgacgccgccgatggcgcgcctgcttgacgccctgccgcttctggccaagggcgacacc
gccgcgctgctcgcccgctgcgaggttgatgccgaagaattggccgcgctggtgacacgg
ttgcggcggctcgacccgaaaccgggggcgcatttcgacgacgcgccggagctgcgccgg
gcgccggatctgatcgccgaacgcgatgagttgggacaatggcatgtcgaactgaacgca
gccagcgcgccgcgcatcgcagtgaccccggttgcgggagccgaacatcgcgcggcgctg
aaagaggcccgctggctggagcggacggtgtcgcgtcgcaacagcctcgtgctggatgtc
gcagcccatgtgctcggcgtccagtacgaggccctcgaacaggggcccgcgtatctcaac
cccctgaactgtgcggatgtggccgcaaacctcggggtgcatgaaacgacgatcaaccgg
gtgcgcaacgggctcttgatccagacgccgcggggcatgatgcctctgcgcgcctttttc
gcccgcggcggggcagggcaccgggatggctcgcatgttcccgccgaagcgatctcggcc
cgcatcgccgggttgatcgcggcggaacgcccggacaagccgctgaccgatcaggaactc
gccacccgtctggcggaggcgggcctgcgcgtgtcgcgccgcacggtgtcgaaccggcgc
cgcatggccgggttccccggggcggcccaaagactgacttcaaaagggagagaagagtga

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