Celeribacter ethanolicus: CEW89_05990
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Entry
CEW89_05990 CDS
T05094
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh02020
Two-component system
ceh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEW89_05990
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEW89_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceh03021
]
CEW89_05990
Transcription machinery [BR:
ceh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEW89_05990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_23
HTH_Tnp_Tc3_2
HTH_Tnp_ISL3
DUF6471
Motif
Other DBs
NCBI-ProteinID:
ATG47159
UniProt:
A0A291G9Q3
LinkDB
All DBs
Position
complement(1244016..1245335)
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AA seq
439 aa
AA seq
DB search
MTGLHLHQSTSQRLTQVMQRAIGLLQMDHAELAGLLIEEAAENPCLTLTLPQGDADSAAP
EPAGAERRSVPGPWRPAFLGSGDEIETLRAHADGLHAHVARQIGLIFRDTRAREIAMVFL
EHLEPSGWLGAPLEDIARQAGCPAAEAEAVLTRLYEVEPAGLFARSLSECLRLQLEEAGD
LTPPMARLLDALPLLAKGDTAALLARCEVDAEELAALVTRLRRLDPKPGAHFDDAPELRR
APDLIAERDELGQWHVELNAASAPRIAVTPVAGAEHRAALKEARWLERTVSRRNSLVLDV
AAHVLGVQYEALEQGPAYLNPLNCADVAANLGVHETTINRVRNGLLIQTPRGMMPLRAFF
ARGGAGHRDGSHVPAEAISARIAGLIAAERPDKPLTDQELATRLAEAGLRVSRRTVSNRR
RMAGFPGAAQRLTSKGREE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcttcatctgcaccagagcacgtctcagcgcctcacacaggtgatgcagcgc
gccatcgggctgttgcagatggatcatgccgaactggccgggctgctgattgaagaggcg
gcggagaacccctgtctgacgctcaccctgccacagggcgatgcggacagcgccgccccc
gagcctgccggggcggagcgccggagcgtgcccggcccgtggcgcccggcgtttctcggc
agcggcgatgagatcgagacgctgcgggcgcatgccgacggcttacatgcgcatgtggca
cggcaaatcggcctgatctttcgcgacacgcgggcgcgggagatcgcgatggtctttctg
gagcatctggaacccagcggctggctcggtgcgccgctcgaagacattgcgcgacaggcc
gggtgtccggcagcagaggccgaggcggtgctcacccgtctgtatgaggtcgaacccgcg
ggcctgtttgcccgctctctctcggaatgcctgcgcttgcaactcgaagaggcgggcgat
ctgacgccgccgatggcgcgcctgcttgacgccctgccgcttctggccaagggcgacacc
gccgcgctgctcgcccgctgcgaggttgatgccgaagaattggccgcgctggtgacacgg
ttgcggcggctcgacccgaaaccgggggcgcatttcgacgacgcgccggagctgcgccgg
gcgccggatctgatcgccgaacgcgatgagttgggacaatggcatgtcgaactgaacgca
gccagcgcgccgcgcatcgcagtgaccccggttgcgggagccgaacatcgcgcggcgctg
aaagaggcccgctggctggagcggacggtgtcgcgtcgcaacagcctcgtgctggatgtc
gcagcccatgtgctcggcgtccagtacgaggccctcgaacaggggcccgcgtatctcaac
cccctgaactgtgcggatgtggccgcaaacctcggggtgcatgaaacgacgatcaaccgg
gtgcgcaacgggctcttgatccagacgccgcggggcatgatgcctctgcgcgcctttttc
gcccgcggcggggcagggcaccgggatggctcgcatgttcccgccgaagcgatctcggcc
cgcatcgccgggttgatcgcggcggaacgcccggacaagccgctgaccgatcaggaactc
gccacccgtctggcggaggcgggcctgcgcgtgtcgcgccgcacggtgtcgaaccggcgc
cgcatggccgggttccccggggcggcccaaagactgacttcaaaagggagagaagagtga
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