Celeribacter ethanolicus: CEW89_06070
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Entry
CEW89_06070 CDS
T05094
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW89_06070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceh03019
]
CEW89_06070
03009 Ribosome biogenesis [BR:
ceh03009
]
CEW89_06070
Enzymes [BR:
ceh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CEW89_06070
Messenger RNA biogenesis [BR:
ceh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEW89_06070
Ribosome biogenesis [BR:
ceh03009
]
Prokaryotic type
rRNA processing factors
CEW89_06070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ATG47172
UniProt:
A0A291GAU2
LinkDB
All DBs
Position
complement(1265811..1268687)
Genome browser
AA seq
958 aa
AA seq
DB search
MAKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPLADREALLAEEMEYAKAQEEEEEKPKRSRRSRSRSRSK
TRAEEVKSADAVETREVTLDEAEQGDEQDGASVAGMDVIEPEASEADAMIADDANADENG
SVEEGTSPAFTVQDTPVEEPDEVAGEAESDTVAEESVSEEETSEDETSEGDDEEADEGDD
EDEADAAEADDGIESVADDDTTEEIRPRRKPRPRKYKIQEVIKVRQIMLVQVVKEERGNK
GAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEIAGELEVPQGAGLIIRTA
GAQRTKTEIKRDYDYLKRMWEQIRELTLKSVAPAKIYEEGDLIKRSIRDLYSKDIDEVIV
EGDGGYREAKDFMKMIMPSHAKNVKPYAESLPLFARYQVESYLAGMFNPVVQLKSGGYIV
IDVTEALVAVDVNSGRATKEGSIEETALKTNLEAAEEVARQARLRDLAGLIVIDFIDMEE
RRNNTAVEKRLKDKLKTDRARIQVGRISGFGLLEMSRQRLRPGMLEATTQPCPHCHGTGL
IRSDDNMALTILRQLEEEGTRKRSREVLLKAPVAIVNYLMNMKREKIAQIETRYGMAVRI
EADPFLISPDFSMERFKTATRVVPEVVAPVISASADLMADYDEEIEDEDLTEDEAEATEA
VSEEVSEETNGDDQKPKKRRRRRRRRKKTDTVDGQDEAQDNGAEDASDEEDSAEGEAPGT
VSEEVAPVEAEEKPKPRRKRRTKAEIEAEKAAKAAEGEASAETGEAADAVAEEKPKPRRK
RRTKAEIEAEKAAKAAAEAEAAAEAPVEPQAEAPVEAASETEAPVSEPVAEAKPVSEAPA
EPVAEAVRAEPVVEAVVAAPVIEVVAEDATPEPELAEVGEPEAAEDDDKPKRRGWWSR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatgctcatcgacgccacccacgcggaggaaacccgcgttgtggtggtc
gacggaaacaaggtcgaggaattcgactttgaatcggaaaacaaacgccagctcgctggc
aacatctatctcgcaaaggtaacccgcgtcgaaccgtccctgcaggcggcgttcgtggat
tacggcggaaaccgtcatgggttcctcgccttctccgagattcatccggattattaccag
atcccgctggccgaccgtgaagccctgctggcagaggaaatggaatatgccaaggctcag
gaagaggaagaggaaaagcccaagcggtcccgccgctcgcggtcgcgttcgcgttccaaa
acccgtgccgaagaggtcaaatctgcggatgcggtcgagacccgtgaggtcacgctcgac
gaggcggaacagggcgacgaacaggatggcgcctctgtcgccgggatggatgtgatcgaa
ccggaggcctccgaggccgatgcgatgatcgcggacgacgcgaatgcggatgagaatggc
tctgtcgaagagggcacgtcgcctgcgttcaccgtgcaggatacgccggtcgaagagccg
gacgaagttgcgggcgaggctgagtcggacaccgtcgcggaagagtctgtttccgaagag
gaaacgtctgaagacgagacctccgagggtgacgatgaagaggctgatgagggcgatgac
gaggacgaggcggacgccgccgaggccgacgacggcatcgaaagcgtcgccgacgatgac
accaccgaggaaatccgcccgcgtcgcaaaccgcgtccgcgcaagtacaagatccaggaa
gtcatcaaagtgcgccagatcatgctggtgcaggtcgtcaaggaagagcgcggcaacaag
ggcgccgctctcaccacctacctgtcgctggccggtcgctattgtgtgctgatgccgaac
accgcgcgtggtggtggcatctcccgcaagatcaccaatgccgcagaccgcaagaaactc
aaagagatcgcaggcgaacttgaagtgccgcagggcgccggtctgatcatccgcacggcg
ggcgcacagcgcaccaagacggagatcaaacgcgactacgactatctcaagcggatgtgg
gaacagatccgcgagctgacgctgaaatcggtggcgcccgcgaagatctacgaagagggc
gacctgatcaaacggtcgatccgcgatctctactcgaaagacatcgacgaggtgatcgtc
gagggcgatggcggctatcgcgaggccaaggacttcatgaaaatgatcatgccgtcccac
gccaagaacgtgaaaccctatgccgagagcctgccgctgtttgcgcgttatcaggtggaa
agctacctcgccgggatgttcaacccggtggtgcagctcaaatccggcggttacatcgtg
atcgacgtgaccgaggcgctggtcgccgtcgacgtcaactcgggccgggccacgaaagag
ggctcgatcgaggaaaccgcgctcaagaccaaccttgaggccgccgaagaggtggcgcgt
caggcgcgtctgcgcgacctggccggtctgatcgtcatcgacttcatcgacatggaagag
cgccgtaacaacacggcggtcgagaagcgtctgaaagacaaactgaaaaccgaccgtgcg
cgcattcaggtgggccgtatctcgggctttggcctgttggagatgtcgcgtcaacgtctg
cgtcccggcatgctcgaggcgacgacacagccgtgcccgcattgtcacggcaccgggctg
atccgctccgacgacaacatggcgctcacgatcctgcgtcagctcgaggaagagggcacg
cgcaaacgctcccgtgaggtgctgctcaaggcgccggtcgccatcgtcaactacctgatg
aacatgaagcgcgaaaagatcgcacagatcgagacgcgctatggcatggcagtgcggatc
gaggccgatccgttcctgatctcgccggacttctccatggagcggttcaagacggcaacc
cgcgtggtgcccgaagtggtcgctcccgtgatttccgcctctgccgatctgatggcggat
tacgacgaggagatcgaggacgaggatctgacggaagacgaggcagaagccacggaagcc
gtgtccgaagaggtttcggaagagaccaatggcgacgaccagaagccgaagaaacgccgc
cgccgtcgtcgtcgtcgcaagaaaaccgatacggtggacgggcaggacgaggctcaggac
aacggggccgaggatgcctccgacgaggaggacagcgccgagggtgaggcccccgggacg
gtgagcgaagaagtcgcgccggtcgaggccgaggagaaaccgaagccgcgtcgcaaacgt
cgtaccaaggcggagatcgaggccgagaaggccgcgaaagctgccgaaggagaggcatcg
gcggagacgggtgaggctgcggatgccgttgccgaggagaaaccgaagccgcgtcgcaaa
cgtcgtaccaaggcggagatcgaggccgagaaggccgcgaaagccgccgccgaggctgag
gctgcggcagaagcaccggtcgagccgcaggcggaagcgcccgtcgaggccgcgtctgag
acggaggcaccggtttctgagcctgtcgcggaagccaagccggtcagcgaagcgcctgcc
gagcctgtggctgaggcggtgagagctgagcctgtcgtggaggcggtcgtggccgcgccg
gtgatcgaagtggttgccgaggacgcgacgcccgagccggagcttgcggaggtgggcgaa
ccggaggccgcggaggacgatgacaaaccgaagcgccgcggctggtggagccgctga
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