Celeribacter ethanolicus: CEW89_12915
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Entry
CEW89_12915 CDS
T05094
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW89_12915 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceh03021
]
CEW89_12915 (rho)
03019 Messenger RNA biogenesis [BR:
ceh03019
]
CEW89_12915 (rho)
Transcription machinery [BR:
ceh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEW89_12915 (rho)
Messenger RNA biogenesis [BR:
ceh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEW89_12915 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
ATPase_2
AAA
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ATG48383
UniProt:
A0A291GCW3
LinkDB
All DBs
Position
complement(2622620..2623891)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEEKLNLADLKAKSPKTLLAMAEELEIENASTMRKGEIMFQILRERADEGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPEVIRQYGLRTGDTVDGVMQAPNETERYFAITK
VTLINFEEPEKARHKIAFDNLTPLYPDERLKMEIEDPTIKDRSARIIDLVAPIGKGQRAL
IVAPPRTGKTVLLQNIAHSIETNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEDLLVDAKDLQKTYVLRRILNPMGTTDAIEFLISKLKQTKTNGEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaaactcaatctggccgatctgaaagccaagagccccaagacccttctg
gcgatggccgaagagcttgagatcgaaaacgcctccacgatgcgcaaaggcgagatcatg
ttccagatcctgcgcgaacgcgcggatgagggctgggagatttccggtgacggtgtgctc
gaagtgctgcaagatggctttggctttctgcgctctcccgaggccaactatctgccgggt
cccgatgacatctacgtctcccccgaggtgatccgccaatacggtctgcgcaccggcgac
acggtcgacggcgtgatgcaggcgccgaacgagaccgagcgctatttcgcgatcaccaag
gtgacgctgatcaactttgaagagcccgaaaaggcgcgtcacaagattgccttcgacaac
ctgacgccgctctaccccgatgagcgcttgaaaatggagatcgaggatccgacgatcaag
gatcgttctgcccggatcatcgacctcgtcgcgccaatcgggaaaggccagcgggccctg
atcgttgctccgccgcgcacgggtaagaccgttttgcttcaaaacatcgcccattcgatc
gagaccaaccaccctgagtgctatctcatagtgttgctgatcgacgaacgtcccgaagag
gtgacggacatgcagcgttcggtgaaaggcgaggttgtgtcctccaccttcgacgaaccg
gccacccgtcacgttgccgtctccgaaatggtgatcgaaaaagccaagcgtctcgtcgag
cacaagcgtgatgttgtcatcctgctcgactcgattacccgtctgggtcgcgccttcaac
actgtcgtgccgtcgtccggcaaggttctgaccggtggtgtcgacgccaacgcgctccaa
cgcccgaagcgtttctttggtgccgcgcggaacattgaggagggtgggtcgctcaccatc
attgccaccgcgcttatcgacaccggctcgcggatggacgaggtcatcttcgaagaattc
aaaggtacgggtaactccgagatcgttctggatcgcaaagtcgcggacaaacgcgtcttc
ccggcgatggacatcctcaaatccggcacccggaaagaggatcttctcgtggatgcgaaa
gatctccagaaaacctatgtgctgcgccgcatcctgaacccgatggggaccacggatgcc
atcgagttcttgatttccaagctgaaacagaccaaaaccaatggcgagttcttcgactcg
atgaacgcttaa
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