Celeribacter ethanolicus: CEW89_15025
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Entry
CEW89_15025 CDS
T05094
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEW89_15025 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceh03021
]
CEW89_15025 (rpoC)
03400 DNA repair and recombination proteins [BR:
ceh03400
]
CEW89_15025 (rpoC)
Enzymes [BR:
ceh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEW89_15025 (rpoC)
Transcription machinery [BR:
ceh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEW89_15025 (rpoC)
DNA repair and recombination proteins [BR:
ceh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEW89_15025 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
DUF7567
Motif
Other DBs
NCBI-ProteinID:
ATG48760
UniProt:
A0A291GFD1
LinkDB
All DBs
Position
3055824..3060071
Genome browser
AA seq
1415 aa
AA seq
DB search
MNQELTTNPFNPLAQPSTFDEIKVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERVLYFENYVVIEPGLTDLSYGQMMTEEEYMDAQDLYGMDAFE
ADIGAEAIRKMLANIDLESTAEQLREDLKEATGELKPKKIIKRLKIVESFLESGNRPEWM
ILTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVFLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYITMQRDGMKGEGMVFSDIEEVEYAL
TAGEVHLHAKITARIKQIDEHGQEVWERHETTPGRLRLGTLLPLNAKAPFSLVNQLLRKK
DVQRVIDTVYRYCGQKESVIFCDQIMSLGFKEAFKAGISFGKDDMVIPDTKWTIVDGTRD
QVKDFEQQYMDGLITQGEKYNKVVDAWAKCNDKVTEAMMNTISAPKYDETGAEQEPNSVY
MMAHSGARGSVTQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIVREVDCGTDRAVTAEAAVNDGEVVATLAERILGRV
SADDVLRPGTDEVLVSKNELIDERKADAIEAAGVASMRIRSPLTCEAEEGVCAACYGRDL
ARGTMVNQGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFQEANQEGKIEFREAN
LLENKHGEQIVMGRNMKLAIMDENGVERASYKLGYGTKVFVTEGQTIGRGVKLFEWDPYT
LPIIAEKTGKAKFVDLITGLSVRDETDDATGMTQKIVSDWRSVPRGGDLKPEILILDEDG
EVLRNEAGNPVTYLMSVDAILSIEDGQDIQAGDVVARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGYVRFGKDYKNKRRISIEPSDDTKEPVEYMVPKGKHIPVAEGDFVH
KGDYIMDGNPAPHDILAIMGVEALANYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKWE
ISESGDTTLLKGEAVDKVEFDEANAKAEAKGGRPAKGQPILLGITKASLQTRSFISAASF
QETTRVLTEASVQGKRDKLVGLKENIIVGRLIPAGTGGATQRVRRIAAERDNVVIEEARA
EAEAAAQLAAPVMDVMGDDAEDTLFVDTPEGSSDE
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactcacaaccaacccgttcaacccgctggcgcagccctcgacgtttgac
gagatcaaggtctctctggcgtccccggaacgcatcctgtcgtggtcctacggggagatc
aaaaagcccgagaccatcaactaccggaccttcaagccggagcgtgacggtctgttctgt
gcgcgtatttttggcccgatcaaagactacgaatgtctctgcggcaaatataagcgcatg
aaatatcgcggcgttgtctgcgaaaaatgcggtgttgaagtcaccctccagaaagtgcgt
cgcgagcgcatgggccacatcgaactggccgcccctgtcgcgcatatctggttcttgaaa
tcgctgccgagccggatcggcctcatgctcgacatgacgctgcgcgatctggaacgcgtg
ctgtatttcgaaaactacgtggtgatcgagccgggtctgacggacctctcctatggtcag
atgatgaccgaagaagagtacatggacgcgcaggatctctatggcatggacgcgttcgaa
gccgacatcggcgccgaagcgatccgcaagatgctcgccaacatcgacctcgagtccacc
gcagaacaactgcgcgaagacctcaaggaggcgaccggtgagctcaagcccaagaagatc
atcaaacgtctgaaaatcgtcgagtctttcctcgaatccggcaatcgcccggagtggatg
atcctgaccgtgatccccgtgatcccgccggagctccgcccgctggtgccgctcgatggt
ggccgtttcgcgacctccgatctcaacgacctttaccgtcgtgtgatcaaccggaacaac
cgtctgaaacgcctgatcgagctgcgtgcgccggacatcatcgtccgcaacgaaaagcgg
atgctgcaagagtcggttgacgctctgttcgacaacggccgtcgtggccgcgtcatcacc
ggcgcgaacaaacgcccgctgaagtcgctctccgacatgctgaaaggtaaacagggtcgc
ttccgtcagaaccttttgggcaaacgcgtcgacttctccggtcgttcggtcatcgtgacc
ggtccggagctgaaactgcaccaatgtggtctgccgaagaagatggcgctcgaactgttc
aagccgttcatctactcgcggcttgaggccaaaggtctgtcttcgaccgtaaaacaggcg
aagaagctggttgaaaaagaacgtccggaagtttgggacatcctcgacgaggtgatccgc
gaacacccggtgttcctcaaccgcgctccgacgctgcaccgtctcggcattcaggcgttc
gaacccacgctgatcgaaggtaaagccattcagctgcacccgctcgtctgttcggcgttc
aacgccgacttcgacggggaccagatggccgttcacgtgccgctgtcgctcgaagcccag
cttgaagcccgcgtcctgatgatgtcgacgaacaacgtgctgtcgcccgccaacggcgcg
ccgatcatcgttccgtcgcaggatatgatcttgggcctttattacatcaccatgcagcgt
gatgggatgaagggcgaaggcatggtcttctccgacatcgaggaagtcgaatacgccctg
accgccggcgaagtgcacctgcacgccaagatcaccgcgcggatcaagcagatcgacgag
cacggtcaggaagtttgggagcgtcacgagacgaccccgggccgtctgcgtctcggcacc
ctgctgcctctgaacgcaaaagcgccgttctctctcgtgaaccagcttctgcggaagaaa
gacgtgcagcgcgtcatcgacaccgtctaccgttactgcggtcagaaagagtcggtgatc
ttttgtgaccagatcatgtcgctcgggttcaaagaggcgttcaaggccgggatttccttc
ggcaaggacgacatggtgatcccggacaccaagtggaccatcgtcgatggcacccgcgat
caggtgaaagactttgaacaacagtacatggacggcctgatcactcagggcgaaaagtac
aacaaagtcgtcgatgcctgggccaagtgtaacgacaaggtcaccgaggcgatgatgaac
accatctcggcgcccaagtacgacgagaccggtgccgaacaggaaccgaactcggtttac
atgatggcccactccggggcccgtggttccgtgacccagatgaaacagctgggcgggatg
cgcggcctgatggcgaaaccttcgggtgagattatcgaaacgccgatcatctcgaacttt
aaagaaggtctgaccgtgctcgagtatttcaactcgacccacggtgcgcggaaaggtctg
tcggatacggcgttgaaaacggcgaactccggttacctgacccgtcgtctcgtcgacgtg
gcgcaggactgtatcgtgcgcgaagtcgattgtggcacggatcgtgccgtgaccgccgaa
gccgccgtcaacgacggtgaggtcgtggcaactctggccgagcgtatcctcggtcgtgtg
tctgccgatgacgttctgcgtccgggcaccgatgaggtgcttgtgtccaagaacgagctg
atcgacgaacgcaaagccgacgccatcgaggcggccggtgttgcctccatgcgcatccgc
agcccgctgacctgcgaggccgaagagggcgtctgtgcggcctgttacggtcgtgacctg
gcccgcggcaccatggtgaaccagggtgaagcggtcggcatcatcgcggctcagtccatc
ggtgaaccgggtacgcagctgacgatgcggaccttccacatcggcggcgtggcccagggt
ggtcagcagtccttccaggaagccaaccaggaaggcaagatcgagttccgtgaagcgaac
ctgcttgagaacaagcacggcgagcagatcgtcatgggccgcaacatgaaacttgcgatc
atggacgaaaacggggtcgagcgcgcctcctacaaactcggctacggcacgaaagtgttc
gtcaccgagggccagaccatcggccgtggcgtgaagctgttcgaatgggacccgtacacc
ctgccgatcatcgcggagaaaaccggtaaagcgaaattcgtcgacctcatcacgggcctg
tccgtgcgtgacgagaccgatgacgcaaccgggatgacccagaaaatcgtgtccgactgg
cgctctgtgccgcgcggtggcgatctgaagccggagatcctgatcctcgacgaagatggc
gaagtgctgcgcaacgaagccgggaacccggtcacctatctgatgtccgtagacgccatc
ctctccatcgaggacggtcaggacattcaggccggtgacgtggttgcgcgtattccgcgt
gagggtgcgaagaccaaggacatcaccgggggtctgccgcgtgtggccgaactgttcgaa
gcccgtcgtccgaaagatcacgcgatcatcgccgagattgatggttacgtgcgttttggt
aaggactacaagaacaagcgtcgcatctcgatcgaaccgtcggacgacaccaaggaaccc
gtcgaatacatggtgccgaaaggcaagcacatcccggtggccgaaggcgacttcgtgcac
aagggcgactacatcatggacggcaacccggcaccgcacgacattcttgcgatcatgggc
gtggaagcgctcgctaactacatgatcgacgaggtgcaggatgtgtatcgactgcaaggt
gtgaagatcaacgataagcacatcgaagtcatcgtgcgtcaaatgctgcagaaatgggag
atctcggaatcgggtgacaccacgctgctcaaaggcgaagcggtcgataaggtcgagttc
gacgaggccaacgccaaagccgaagccaagggcggtcgcccggcgaaaggtcagccgatc
cttctcgggatcaccaaggcctcgctgcaaacccgctccttcatctcggcggcctccttc
caggagaccacccgtgttctcaccgaggcgtccgtgcagggcaaacgcgacaagctcgtg
ggtctcaaagagaacatcattgtgggtcgtctgatcccggccggcaccggtggcgccacc
cagcgcgtccgccgcattgccgccgagcgcgacaacgtggtgatcgaggaagcccgtgca
gaggccgaagccgccgcacaactggcggccccggtcatggatgtgatgggcgacgacgcg
gaagacacgctcttcgtcgacaccccggaaggctcctccgacgagtaa
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integrated database retrieval system
