Celeribacter ethanolicus: CEW89_18140
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Entry
CEW89_18140 CDS
T05094
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW89_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceh03019
]
CEW89_18140
Enzymes [BR:
ceh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEW89_18140
Messenger RNA biogenesis [BR:
ceh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW89_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATG49327
UniProt:
A0A291GGL9
LinkDB
All DBs
Position
complement(3688582..3689889)
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AA seq
435 aa
AA seq
DB search
MTDFSMLGLKPKLLDVLKEIGIETPTPIQARAIPEVMNGRDVMGLAQTGTGKTLAFGLPL
LHMAFSDGSKPAPKTVRALILAPTRELVNQIADGLFPFIKGSHLKLNRVVGGVSINAQIN
RLDRGTDILVATPGRLMDLIDRKAVRLDETTFLVLDEADQMLDMGFIHALRKLVPMLAQE
RQTMLFSATMSKEMNEIAQSYLTSPIRIEVSPPGKAADKIDQEVHFIPQPEKYELLKELL
CNHSDELALVFSRTKHGAERMAKNLVRDGFEAGAIHGNKSQGQRERTLAAAKSGKLKVLV
ATDVAARGIDIPAVRHVYNYELPNVPENFVHRIGRTARAGRDGKAVAFCSPTELDDFRAI
EKVMKIRIPVATKASWAADDQKAQPKPKPQGRRGGGGGPRGANSGGGKPAGGKPGAPKGA
GRPGGGRPQRRRSRG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttttccatgctcggcctcaagccgaagctgctcgatgtgttgaaagagatc
ggcatcgagaccccgacccccattcaggcccgcgccattcccgaagtgatgaacggccgc
gacgtcatgggccttgcgcagaccgggacgggcaagacgctcgcctttggcctgccgctt
ttgcacatggcgttttccgatggctcgaaacccgcgcccaagaccgtgcgcgcgctcatt
ctcgccccgacccgcgagctggtcaaccagatcgccgacgggctgtttccgttcatcaag
ggctcgcatctcaagctcaaccgcgtcgtgggcggcgtgtcgatcaacgcccagatcaac
cgtctggatcgcggcaccgacattcttgtcgccacgccgggtcgtctgatggacctgatc
gaccgcaaggccgtgcgtctcgacgaaaccaccttccttgtcctggacgaggccgaccag
atgctcgacatgggcttcatccatgccctgcgcaaactcgtgccgatgctggcccaagag
cggcagaccatgctgttctccgccaccatgtcgaaagagatgaacgagatcgcccagagc
tacctgacctctccgatccgcatcgaagtgtcgcctccgggcaaggccgccgacaagatc
gaccaggaagtgcatttcattccgcagccggagaaatacgagctgttgaaagaactgctc
tgtaaccactccgacgagctggcgctggtgttttcccgcaccaaacacggggcggagcgg
atggcgaagaacctcgtgcgcgatggtttcgaagccggtgcgattcacggcaacaaatcg
cagggccagcgcgagcgcactctggcggcggcaaaatccggcaagctcaaggtgctggtc
gcgaccgatgtggccgcgcgcgggatcgacatcccagcggtgcgtcacgtctataactac
gagctgccgaatgtgccggaaaacttcgtgcaccgcatcggccggacggcgcgtgcgggc
cgcgacggcaaagccgtggccttctgttcgccgaccgagctggacgattttcgcgccatc
gagaaagtgatgaagattcgcattcccgtggcgaccaaggcctcatgggctgccgacgac
cagaaggcccagccgaagcccaagccgcagggacgccgcgggggcggtggcggtccgcgt
ggtgcgaactccggcggcggcaaaccggcaggcggcaaacccggcgcccccaaaggggca
ggacgtcccggaggcggtcgcccgcagcgcagacggtctcgcggctaa
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