Celeribacter ethanolicus: CEW89_19465
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Entry
CEW89_19465 CDS
T05094
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ceh
Celeribacter ethanolicus
Pathway
ceh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ceh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEW89_19465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceh03021
]
CEW89_19465
Transcription machinery [BR:
ceh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEW89_19465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
ATG49558
UniProt:
A0A291GHC7
LinkDB
All DBs
Position
3939092..3941089
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AA seq
665 aa
AA seq
DB search
MAAKDNDDAKSDDQDQDVMLDVSQAAVKKMIAEAREKGYITYDQLNKVLPPEQVSSEQIE
DVMSMLSEMGINVIEDEEVEDDDNADGEAKGGELVATSGSREVAMASSETEKLDRTDDPV
RMYLREMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFQAITIWHDELLSEDILL
RDVIDLEATFGGGVDEDEDEENVVEGLNAEATAGESKEKEQEYDADGNPISSDEDEDDDE
QANMSLAAMESALKPQVLETLARISEDFAHLSEMQDLRMSATLNEDGSFSEGAEAEYQKL
RSEIVVLVNSLHLHNNRIEALIDQLYGINKRVMSIDSAMVKLADQARINRREFIEDYRGS
ELDPTWLDRMAEKPGRGWQMFVERFSDKVEELRSDMAMVGQYVGVDISEFRRIVAQVQKG
EKEARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFS
TYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQ
MPLEKVRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDAAIQENLKETTTRVL
ASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLR
SFLDQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagacaatgacgacgccaagagtgacgatcaggaccaggacgtgatgctc
gacgtgagccaggccgcggtcaagaagatgatcgccgaggcgcgtgaaaaaggctacatc
acctacgatcagctcaacaaggtcctgccaccggagcaggtgagttccgagcagatcgag
gatgtgatgtcgatgctctccgaaatgggcatcaacgtcatcgaggacgaagaggtcgaa
gacgacgacaacgcggacggcgaggccaagggcggcgagctggtcgcgacctccggctcg
cgcgaagtggcgatggcctcctccgagaccgaaaaactcgaccgcacggacgatccggtg
cgcatgtacctgcgcgagatgggctcggtcgagctgctgtcgcgcgagggcgagatcgcg
attgcgaaacgcatcgaggccgggcgtaacacgatgatcgccgggctctgcgaaagcccg
ctgaccttccaggcgatcaccatctggcatgacgaacttctgtccgaggatattctcctg
cgcgacgtcatcgacctcgaagccacgttcggcggcggcgtcgatgaggacgaggacgag
gagaacgtcgtcgaagggctgaacgcggaggcgaccgccggggagtccaaggaaaaggaa
caggaatacgacgccgacggcaatccgatttcctccgacgaggacgaggatgatgacgag
caggcgaacatgtcgcttgcggcgatggaatcggcgctgaaaccgcaggttctcgaaacg
ctggcgcggatttccgaggatttcgcccatctgtccgagatgcaggacctgcggatgtcc
gccacactcaacgaggacgggtcgttctcggaaggggcggaggccgagtatcagaagctg
cgctccgagatcgtggttctggtgaactcgctgcacctgcacaacaaccggatcgaagcg
ctgatcgaccagctctacggcatcaacaaacgcgtcatgtcgatcgacagcgccatggta
aaactcgccgaccaggcgcggatcaaccggcgcgagttcatcgaggattatcgtggttcc
gaactggacccgacctggctcgaccgcatggcggagaaaccgggccgtggctggcagatg
ttcgtcgaacgcttctccgacaaggtcgaggagctgcgctccgacatggccatggtcggg
cagtatgtcggcgtcgacatctccgaattccgccgcatcgtggcgcaggtccagaaaggc
gagaaagaggcccgtcaggccaagaaggaaatggtcgaggccaacctgcgtctcgtgatc
tcgattgccaagaaatacaccaaccggggcctgcaattcctcgatctcattcaggaaggc
aacatcggtttgatgaaggcggtcgataaattcgaataccgtcgcggctataaattctcg
acttacgccacatggtggatccgtcaggcgatcacgcgctccatcgcggatcaggcccgc
accatccgtattccggttcacatgatcgagacgatcaacaagctggttcggaccggccgt
cagatgctgcacgagatcggccgcgaaccgacgccggaagaattggccgaaaagctgcaa
atgccgctcgaaaaggtccgcaaggtgatgaaaatcgccaaggagccgatctctctggag
acgccgatcggcgacgaggaagacagccagcttggcgatttcatcgaggacaagaacgcg
gttctgcccctcgacgcggccattcaggagaacctcaaagagaccaccacgcgcgtgctg
gcctcgctcacgccccgcgaagaacgcgtgctgcggatgcggttcgggatcggcatgaac
accgaccacacgctcgaagaggtggggcaacagttctccgtgacccgcgaacggattcgt
cagatcgaggcgaaggctttgcggaagctgaaacacccctcgcggtcgcggaagctgcgg
tcgttcttggatcagtaa
DBGET
integrated database retrieval system
