Corynebacterium epidermidicanis: CEPID_02170
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Entry
CEPID_02170 CDS
T03955
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEPID_02170 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cei03021
]
CEPID_02170 (rpoA)
03400 DNA repair and recombination proteins [BR:
cei03400
]
CEPID_02170 (rpoA)
Enzymes [BR:
cei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEPID_02170 (rpoA)
Transcription machinery [BR:
cei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEPID_02170 (rpoA)
DNA repair and recombination proteins [BR:
cei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEPID_02170 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AKK02315
UniProt:
A0A0G3GP32
LinkDB
All DBs
Position
430713..431729
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEYVDEARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTINGVKEDVSDIILNIKGIVLSSDSDEPVVMYLSKTGEGEVTAGDIQPPAGVEIHN
PDLHIASLNEQGRLEIEMVVERGRGYVPATLNAGGGEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSITARDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EHIAAYGMAIEDLNFSVRSYNCLKRQEIHTVGELAECTEADLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPTQIEGYDAETGEFIDFDADDTE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgtcccacgcttaccgaagaatacgtagacgaagcacgctcccgg
ttcatcatcgaaccactggagccaggctttggatacaccctcggtaactcgctgcgccgc
accttgctgtcttccatcccgggggcggcagtgaccagcgtaaagattgacggtgtgctc
catgagttcaccacgatcaacggtgtgaaggaagacgtctctgacatcatcctcaacatc
aagggcattgtgctgtcttctgactccgatgagccagtagtcatgtacctcagcaagacc
ggcgaaggggaggtcaccgctggtgacatccagcctccagctggtgtggagatccacaac
ccggatctgcacattgcttccctgaatgagcagggtcgtctcgaaatcgaaatggtcgtg
gagcgtggccgtggctacgtcccagctaccctgaatgccggtggcggcgagatcggtcgc
atcccagtcgaccagatctactccccagtactgaaggtgtcctacaaggtggaagctact
cgtgttgagcagcgcaccgacttcgacaagctgatcatcgatgtagagaccaagaactct
attaccgcacgtgacgccctcgcatctgcaggcaagaccctagttgaactgttcgggctc
gctcgcgagctaaacacggccgccgaaggcatcgagatcggaccatctccacaggagacc
gagcacatcgctgcctacggaatggcaattgaggacctgaacttctccgttcgctcctac
aactgcctgaagcgccaggagatccacaccgttggtgagctcgcagagtgcaccgaagcg
gacctgctggacatccgcaactttggtcaaaagtccatcaacgaagtcaagatcaagctc
gcgggcttgggcttgaccttgaaggacgccccagaggacttcgatccaacccagatcgaa
ggctacgacgctgaaaccggcgagttcatcgatttcgacgccgacgataccgagtaa
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