Corynebacterium epidermidicanis: CEPID_03610
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Entry
CEPID_03610 CDS
T03955
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CEPID_03610
09124 Replication and repair
03420 Nucleotide excision repair
CEPID_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cei03021
]
CEPID_03610
03400 DNA repair and recombination proteins [BR:
cei03400
]
CEPID_03610
Enzymes [BR:
cei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEPID_03610
Transcription machinery [BR:
cei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CEPID_03610
DNA repair and recombination proteins [BR:
cei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CEPID_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKK02596
UniProt:
A0A0G3GMY8
LinkDB
All DBs
Position
complement(732530..734170)
Genome browser
AA seq
546 aa
AA seq
DB search
MALGDGPLIVQSDKSVLLEIDHPLAGEARAALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEQVVDMLEKYSRFPVPQPLLIDVAETMSRYGRVRLHKHPAHGLVLESQEAAILAE
LQRHKKIKPMLGAAIDAENIAVHPSERGRLKQELLKVGWPAEDLAGYVDGESHPIALVED
GWQLRDYQSYAADAFWEGGSGVVVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAGRQWR
DELLRRTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWGLIVYD
EVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGFI
ATADCVEVRVTLADDERMAYAVAEPAERYRLAACSPAKTRVVKRLLEQHKGQPTLIIGAY
IDQLEEIAAKLEVPVIEGKTSNRKREKLFEQFRIGELNTLVVSKVANFSIDLPEAAVAIQ
ISGTFGSRQEEAQRLGRLLRPKADGREAHFYTVVARDTLDAEYAAHRQRFLAEQGYAYRI
IDADDI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcactcggcgacggccccctcatcgttcagtccgataagtcagtcttgttggaaatc
gatcacccgctggccggagaagcccgcgcggcactcgcaccatttgctgagttagagcgc
gcccccgaacatatccacacgtaccggatcactccactcgcactctggaacgcgcgcgcc
gccggacacgatgccgaacaggtggtggacatgttggaaaagtactcgcgcttcccggtc
ccgcagccgttgcttatcgacgtcgctgagaccatgtcccgctatggacgcgtccgtctg
cataaacacccagcgcacggcctcgtccttgagtcgcaagaagcagcaatcctggctgag
ctccagcgacacaagaagatcaaaccgatgctgggcgcagccatcgatgccgaaaacatc
gccgtccatccgtctgagcgtggccgtctcaagcaagagctgctcaaagtcggctggccg
gcagaagatctcgctggctacgtcgacggcgaatctcacccgattgcgttggtggaagac
ggctggcagctgcgcgactaccagtcttatgccgccgatgcattttgggaaggtggctct
ggcgtggtggtattgccgtgtggtgcaggaaagaccatggtcggcgcggccgcgatggct
aaggctcaagccacgacgctgatcctggtaaccaacaccgttgcaggccggcaatggcgc
gacgaacttctgcggcgcacctcactcaccgaagatgagatcggcgaatactccggtgag
aagaaagagattcgcccggtaaccattgccacgtaccaggtagttacgcgcaaaaccaag
ggcgaataccgcgccctcgaacttttcgactcccgagactggggactcatcgtctacgac
gaagtccaccttctccccgcccctgtcttccgcatgacctcggacctgcagtcccgtcgt
cgcctcgggctcaccgctacccttgtgcgtgaggacggtcgcgaaggcgacgtattctcc
ctcatcggccccaagcgctacgacgccccgtggaaagacatcgaagcccaaggcttcatc
gccacggccgattgcgtcgaggttcgcgtcacgcttgccgacgacgaacgcatggcgtac
gccgtcgcggagcctgccgaacggtatcgcctggcagcctgttcaccagccaagacacgc
gtcgtgaagcgactgctcgagcagcacaagggccagccgacgctcattatcggtgcatac
attgaccaattggaggagattgcggcgaagctggaggtaccggtgattgaggggaagacg
tcgaacaggaagcgcgagaagctgtttgagcagttccgcatcggcgaactgaacacgctt
gtcgtgtctaaggtggcaaacttctcaattgaccttccggaagcggcggtcgcgatccag
atttccggcacattcggatctcggcaggaagaggcccaacgacttggacgtctgctgcgg
ccgaaggccgatgggcgcgaggcgcatttctatacggtggtggcgcgcgatacgctagat
gcggaatatgcagcccaccgccagcgttttctcgcagagcagggctacgcgtaccgcatt
atcgacgccgacgacatctaa
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