Corynebacterium epidermidicanis: CEPID_05050
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Entry
CEPID_05050 CDS
T03955
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEPID_05050 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cei03021
]
CEPID_05050 (rho)
03019 Messenger RNA biogenesis [BR:
cei03019
]
CEPID_05050 (rho)
Transcription machinery [BR:
cei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CEPID_05050 (rho)
Messenger RNA biogenesis [BR:
cei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEPID_05050 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
S1CSD-TOTE-2
NACHT
CDC27
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKK02879
UniProt:
A0A0G3GP02
LinkDB
All DBs
Position
1043856..1045829
Genome browser
AA seq
657 aa
AA seq
DB search
MTEQDNATQSGAGTVNLQALRMPELRKMAEERGIRGISALRKSELIAAIQGKTGGQASSE
GATKPRRVTRRTAASEPAAAGGAAQTEAPQTSKPAVAEAEHEVTVAETAAPRRRRAVVKR
DEINAASESAAAEKPAAAEQKEEASTSRAEQRDGQEGGESRREEGEQRYESRSAARRARR
NRARNMHRDQSSGDNAGEQDRNQDRAEGSESDAHEDSRDDRQHNGRGDREERRGRRNRRE
RVGRNRRDRDGRDNRDNGEEVHEDDVLQPVGGILDIVDSNAAFVRTTGYQAGSADVFVPQ
QMIRKFGLRRGDAVTGQVKMPREGQNNHGGGRNRHKFNPLVRVDSVNGKPVEEAKNRPEF
GKLTPLYPNQRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIT
TNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQ
GQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTII
ATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLVPEE
ARIMHKLRRILSALDNQQAIDLLIKQLKKTKSNGEFLMQVASSAPMAADTENEGDYS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaacaggacaacgccactcaatcgggcgctggaaccgtcaaccttcaagctctc
cggatgccggagctgcgcaagatggccgaagaacgcggaatccgtggcatctcggccctg
cgcaagtccgaactcatcgccgccatccagggaaaaactggtggacaggcaagctcggaa
ggcgccaccaagccacgtcgggttactcgacgtacagcagcttccgaacctgcagctgct
gggggagcagctcaaaccgaggcaccacagacttctaagccagctgtcgccgaagcggaa
catgaggtgaccgtggcggagaccgccgcaccacgccgacgtcgggccgtcgtcaagcgc
gatgagatcaatgctgccagcgagagcgcggcagccgaaaaaccagctgcagcagaacag
aaggaagaagctagcacctcccgcgcggagcagcgtgacggccaggagggtggcgaatcg
cgtcgcgaagaaggcgaacagcgctacgaatcccgttcggctgcgcgccgggcgcgtcgc
aaccgggcacgcaacatgcatcgggaccagtcgtctggcgacaatgccggtgaacaggat
cgtaaccaggatcgggcagagggctcggagtcggatgcccacgaggattcacgggatgat
cgtcagcacaatggccgtggtgatcgcgaagagcgtcggggacgtcgcaaccgccgagag
cgagttggccgcaaccgtcgcgaccgggacggacgtgacaaccgcgacaacggcgaggaa
gtccacgaagatgacgttttgcagccagtcggcggtattctcgacatcgtcgatagcaac
gccgccttcgtgcgcaccacgggctaccaggcaggcagcgcggacgtgttcgtgccacag
cagatgatccgtaagttcggcctgcgccgaggcgacgcggttactggccaggtcaagatg
ccacgcgaagggcagaacaaccacggtggcggccgtaatcgccacaagtttaacccgctg
gtgcgcgtggactctgtcaacggcaagcctgtcgaggaagccaagaaccgtccagagttc
ggcaagctcaccccactgtaccccaaccagcgcctgcgtttggaaaccgatccaaagatc
ctgaccacccgcgtgatcgacctcatcatgccgatcggtaagggccaacgagccttgatc
gtgtccccaccaaaggctggtaagaccacgattctgcagaacatcgccaacgcgatcacc
accaacaaccctgagtgctacctcatggtcgtgcttgtcgacgagcgcccggaagaagtc
acggacatgcagcgcagcgtcaagggcgaagtcattgcctcgacattcgaccgcccgcca
agcgaacacaccgcggtggcggagctcgctatcgagcgcgccaagcgcctggtggagcag
ggccaggacgtggttgttttgctcgactcgatcacccgtttgggccgtgcatacaacaac
tcttcgcctgcctccggccgcatcctctccggtggtgtggactccaacgctctctacccg
ccgaagcgcttccttggtgctgcccgcaacatcgaaaacggcggttcgctcacgatcatc
gctaccgccatggtagagaccggctcggccggcgacaccgtgatcttcgaagagttcaag
ggcaccggcaacgccgagctcaagctcgaccgcaagatctctgagcgtcgcgtgttccca
gctgtggatgttaatccttccggcacccgcaaagacgaactcttgcttgttccggaggaa
gcacgcatcatgcacaagctgcgtcgtattctctcagcgctggacaatcagcaagccatc
gatctgctgatcaagcagctgaagaagaccaagtccaacggtgaattcctcatgcaggtc
gcgtcgtccgcgccgatggctgcagacaccgagaacgaaggtgactactcctaa
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