Corynebacterium epidermidicanis: CEPID_07555
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Entry
CEPID_07555 CDS
T03955
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEPID_07555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cei03019
]
CEPID_07555
Messenger RNA biogenesis [BR:
cei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEPID_07555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKK03361
UniProt:
A0A0G3GQ73
LinkDB
All DBs
Position
complement(1564076..1566142)
Genome browser
AA seq
688 aa
AA seq
DB search
MTESRNRARKVTRKAGPPEVEAVVFQAPEAAVQSAEPATQDGEQASESAGNGRGRGAGNS
AGNNSGNRRGGRGRGRNGNGNGGNGNAGNNGGGNNRGRRNVVKSMQGADLTERLPEPPQA
PKDGLRIVALGGISEIGRNMTVFEYKGRLLIVDCGVLFPSSGEPGVDLILPDFSYMEGKW
DKVEALVVTHGHEDHIGAIPWLLKQRHDIPILASRFTLALIAAKTKEHRQRPKLIEVNEQ
SNVNRGPFNLRFFAVNHSIPECLGIAIKTGAGLVVHTGDIKLDQTPTDGRPTDLPAMSRL
GDEGVDLFLCDSTNATTPGVSGSESEIGPTLKRLVVDAKQRVIIACFASNVYRVQAAIDA
AVASGRKVAFNGRSMIRNMEIAEKMGLLKAPRGTIIQMDEAAKLAPHKVLLVTTGTQGEP
MAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVITGRDAKVH
TSGHGYSGELLFLYNAVRPRNAMPVHGEWRHLRANKELAISTGVQRDRVVLAQNGVVVDL
VGGRAQVVGQIPVGNLYVDGVTMGDIDAKVLEDRTSMGEGGVIDITAVIDNRTGRLLERP
TARALGFSEDAVAMMPEIADLVETIMIEQAGEGENDPYRIAQQVRRKVARFVEQKWRRKP
FVMPTVVPMASDTAVVDDADLHNARPSL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctcgtaatcgcgcccggaaggtaacccggaaagccggaccacctgaggta
gaggctgtagttttccaagcccctgaggcagcagtacaaagtgctgagcctgcaactcaa
gatggggaacaggcgtcggaaagcgccggcaacggtcgtggccgaggagcaggcaattct
gctggcaacaactccggcaaccgtcgcggtggccgaggacgcggccgaaacggcaacggc
aacggcggcaacggcaacgcaggaaacaacggtggtgggaacaaccgtgggcgtcgtaac
gtggtgaagtcgatgcagggcgctgacctgaccgagcgcctccccgagccgccgcaggct
ccgaaggatggccttcggattgtcgctctgggtggtatctcggagattggccgcaacatg
acggtctttgagtacaaaggccgactgctgatcgtcgactgtggcgtcttgttcccatct
tctggtgaacctggtgtggacttgatccttcccgacttctcctacatggagggcaagtgg
gacaaggtggaagctcttgtggttacccacgggcatgaagatcacatcggcgccatccca
tggctgctcaagcaacgccatgacatcccgatcctggcttcgcgtttcaccctcgcgttg
attgctgcgaaaactaaggaacaccgccagcgaccaaagctcatcgaggtcaacgagcag
tctaacgtgaaccgtggcccattcaacctgcgctttttcgcggtcaaccactcaatccca
gagtgcctcggcattgccatcaagacgggtgctggcctggtggttcacaccggtgatatc
aagctcgaccagaccccaactgatggccggccaaccgacctcccagcaatgtctcgcctt
ggtgacgagggcgtggacctcttcctctgtgactccaccaacgccaccactcctggcgta
tcaggttcggagtccgaaatcggacctaccctcaagcgcctggtcgttgacgccaagcaa
cgcgtgatcatcgcctgcttcgcatccaacgtgtaccgggtgcaagccgccatcgacgcc
gctgtcgcttctggtcgcaaggttgccttcaacggtcgttccatgattcgcaacatggag
atcgctgagaagatgggcctgctaaaagccccacgtggcaccatcattcaaatggacgaa
gctgccaagctcgctccacataaggtgctgctggtcaccactggtacccaaggtgagccg
atggctgctctttcgcgcatggctcgtcgtgagcaccgccaaatcacggttcgtgatggc
gacctcatcatcctgtcttcctcgctggtgccaggcaatgaggaagccgttttcggtgtg
atcaacatgctcgcccaaatcggcgccactgtgatcacgggtcgcgatgctaaggtgcac
acctccggccatggctactctggtgagctgctgttcctctacaatgcggttcgtccgcgc
aatgccatgccggtgcatggcgaatggcgccacctgcgtgccaacaaggaattggcaatt
tccactggtgtgcagcgtgatcgcgtcgtcttggcgcaaaacggcgttgttgttgacctg
gttggtggacgtgcccaggtagtgggccagattccagtcggtaacctttacgtcgacggc
gtcaccatgggcgatattgacgcgaaggtgctcgaagaccgcacgtcgatgggcgaaggt
ggtgttatcgacatcactgccgttatcgacaaccgcaccggccgattgctggaacgtcca
accgcccgcgccctcggcttctccgaagacgcagtggcaatgatgccggagatcgccgac
ttggtcgagaccatcatgatcgagcaagcgggcgaaggcgaaaacgatccttaccgcatc
gcccagcaggtacgacgcaaggtcgcccgcttcgttgagcagaagtggcgtcgtaagccg
ttcgtcatgccaaccgtcgtgcctatggcatcggacaccgcggtcgtcgacgatgccgac
ctgcataacgctcgcccgagcctgtag
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