Corynebacterium epidermidicanis: CEPID_08240
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Entry
CEPID_08240 CDS
T03955
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cei
Corynebacterium epidermidicanis
Pathway
cei03030
DNA replication
cei03430
Mismatch repair
cei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEPID_08240 (dnaE)
03430 Mismatch repair
CEPID_08240 (dnaE)
03440 Homologous recombination
CEPID_08240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cei03032
]
CEPID_08240 (dnaE)
03400 DNA repair and recombination proteins [BR:
cei03400
]
CEPID_08240 (dnaE)
Enzymes [BR:
cei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEPID_08240 (dnaE)
DNA replication proteins [BR:
cei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEPID_08240 (dnaE)
DNA repair and recombination proteins [BR:
cei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEPID_08240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKK03498
UniProt:
A0A0G3GVC9
LinkDB
All DBs
Position
complement(1711189..1714749)
Genome browser
AA seq
1186 aa
AA seq
DB search
MSNSSFVHLHNHTEYSMLDGMAKIDMLADEVLRQGMPAVGITDHGNMFGSDAFYRKMTEV
GVKPIIGIEAYLAPESRFNKQRIKWGEPHQKSDDVSASGAYLHQTMVAENAEGLQNLFYL
SSMASYEGQLGKWPRMDAEIIAERASGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD
IYGKENYFLELMDHGLDIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAQAHEAMLCV
QTGKTLHDEDRFKFDGTGYYIKSAAEMRASWDHTVPGACDNTLLIAERVQDYGEIWEPHT
HDRMPIADVPEGETPTSWLHKEVMRGLQDRFPGKEVPQEYIDRANYEIEVIDMKGYPSYF
LIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPIEHDLLFERFLNPERPSAPD
IDIDFEDRRREEMIHYATERWGEDKIAQVITFGTVKTKQAIKDSARVQFGQPGYQIADRI
TKALPPAIMAKDIPLSGITDPEHPRYGEAGEVRQLIETDPDVRKIYDTARGLEGVVRQAG
VHACAVIMASVPLLDCIPMWKRQQDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDAL
ENIKRNRGIDLDLENLSTEDPETYKLLARGDTLGVFQLDGGGMRELLKRMEPTGFDDIVA
ALALYRPGPMGVNAHLDYADRKNGRQEIKPIHPELEEPLKEILGDTYGLIVYQEQIMRIS
QKVANYTAGQADGFRKAMGKKKPEVLAKEFVNFEAGMKSNGFSDGAIKALWDTIEPFAAY
AFNKSHAAGYGLVSFWTGYLKANYTAEYMAALLTSVADKKDKSAIYLADCRHLGLKVMPP
DINESVLDFVAVGDDIRFGLGAVRNVGEDVVESIVATRAEKGHFKDFSDYLDKIDTVPCS
KRVTESLIKAGAFDSLGHPRKGLVLVHEDAVDSVIATKKAADKGQFDLFAGFGADDGGDT
TNFFAVQVPDEEWDRKHELALEREMLGLYVSGHPLDGFEEALAAQTDTALTTILGGELKH
GTEVTIGGIIASVDRRFSKRDGSPWAIVTVEDHNGASVELLVFNKVYALVATQLVEDNII
LAKAHVSIRDDRMSLFCDDLKAPELGAGNGQGLPLKLVMRTDQCTMENIAKLKQVLLSNA
GESDVYLKLVDGEHSTMMVLGDHLRVNRTGSLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcttccttcgtgcatctgcataaccacactgaatattcgatgctcgacgga
atggcaaaaattgacatgcttgccgacgaggttttgcgccaaggtatgccggcggtagga
atcaccgaccacggcaacatgtttggctcagatgccttttaccgcaagatgaccgaggtg
ggggtcaagcccatcatcggtattgaggcctacctcgcgccggaatcacgcttcaacaag
cagcgcatcaagtggggcgagcctcaccagaagtcggacgacgtgtctgcatccggcgca
tatctccaccagacgatggtcgctgaaaatgccgaggggctgcaaaatctcttttacctg
tcctcgatggcctcctacgaggggcagcttggcaaatggccacgcatggatgcggaaatc
attgccgagcgggcctcaggcatcatcgccaccaccggctgcccctccggagacgtccag
actcgcctgcgcctgggacagttcaatgaagcgctcgaagccgctgcgatgtggcaggac
atctacggtaaggaaaactacttcctggagttgatggatcacgggcttgatattgaaaac
cgcgtgcgttcggagctgctcgaaattggtcggaaactcgacttgccaccactagtcacc
aatgactgccactatgtgctcgaatcccaagctcaggcccacgaagcgatgctgtgcgtg
caaaccggtaagacgctacacgacgaagataggttcaaattcgacggcaccggttattac
atcaagtcagctgccgagatgcgtgcctcgtgggaccataccgtgccaggcgcgtgcgat
aacacgctgctcatcgccgagcgagttcaagactacggagagatctgggaaccacacacg
cacgaccgcatgccgattgcggatgtgccggaaggcgaaactccaacatcttggctgcac
aaagaagtaatgcgtggcctgcaagaccgattccccggcaaagaggtaccgcaggagtac
atcgatcgcgcgaactatgagatcgaagtcatcgatatgaagggctatccttcttacttc
ctcatcgtcgctgagctcatcaaacacgcccgttctgtaggcatccgcgtggggcccggg
cgtggttcggcagccggcgcactcgtcgcctatgcattgacgattacaaatattgacccg
atcgagcatgacctactgttcgagcgattccttaatccggaacgaccttcggcgcccgat
atcgatattgactttgaggatcggcgccgtgaagaaatgattcactacgccaccgagcgt
tggggcgaggacaaaatcgcccaggtgatcaccttcggcactgtgaaaacgaaacaggcc
atcaaggactccgcccgcgtgcaattcggtcagccgggctatcagatcgctgaccgcatc
accaaggcgctgccacctgcgatcatggccaaagatattccgctgtccggtatcaccgat
cccgagcacccccggtacggggaagctggcgaggttcgacagttaattgaaactgacccc
gatgtgcgcaagatttatgacactgcgcgcggacttgagggcgttgtgcggcaagctggc
gtccacgcgtgtgcggtgattatggcgtcggtaccgctgctggactgcatcccaatgtgg
aaacggcaacaggacggcgcactgattaccggatggccttatccggcgtgcgaagctatc
ggcttgctgaagatggactttctggggttgcgtaacctcacggtgatcggtgacgcgctg
gaaaacatcaagcgcaaccgtggcattgaccttgacctggagaatctgtccacggaagat
ccggaaacctacaaactccttgcccgcggcgacaccctgggcgtgttccagctcgacggt
ggtggcatgcgagagctgctgaagcgaatggagccaaccggcttcgacgacatcgtcgcc
gccctggcgctttaccgcccaggtccgatgggcgtgaacgcccacctggactacgccgac
cgcaagaatggacgccaggaaatcaagccgattcaccctgaactggaagagccactcaag
gaaatcctgggcgatacctatggtctgatcgtgtatcaggagcagatcatgcgtatttcg
caaaaggtcgcaaattacacggctggccaagcagacggcttccgcaaggccatgggtaag
aagaaacccgaggtgttggcgaaagagttcgtcaactttgaagctgggatgaagtccaat
ggcttctccgatggggcaatcaaggcgctgtgggacaccatcgaaccatttgcggcctac
gcgtttaacaaatcgcacgccgccggctatggtttggtgtccttctggaccgggtacctg
aaggccaactacactgcggaatacatggctgcattgttgacgtcagtggcagataaaaag
gataaatctgctatctacctcgcggattgtcgccaccttggtctgaaagtcatgccgcct
gacatcaacgagtcagttctcgacttcgtggccgtgggcgatgacatccgcttcggtttg
ggtgcagtgcgtaacgtcggtgaagacgtggtcgaatcgatcgttgccactcgcgccgaa
aaaggccacttcaaggacttttcggactacctcgacaagattgacaccgtgccgtgtagc
aagcgcgtgactgagtcgctcatcaaggcgggggctttcgattccctggggcatccgcgt
aaagggcttgtgttggtccatgaagatgccgtcgattcggtaattgccaccaaaaaggca
gcggacaagggccagttcgatttgtttgctggtttcggagctgacgacggcggggacacc
acaaacttcttcgctgtacaagtccctgacgaggaatgggaccgcaagcacgaactggcg
ttggaacgggaaatgctgggcttgtacgtgtccggacacccgctcgatggctttgaagaa
gcattggccgcgcaaaccgacaccgccctcaccacgatcttgggcggcgagctcaaacat
ggcacggaagtgactatcggcgggattattgcgtccgtcgaccggcgcttttccaagcgg
gacggctcgccgtgggctattgtcacggtggaagaccacaacggtgcttccgttgagttg
ttggtgttcaacaaggtttacgccttggtggcaacccagctggtggaagacaacatcatc
ttggccaaggcacacgtctcgatccgcgacgaccgcatgtcactgttctgcgatgacctc
aaagcacctgaattgggcgccggaaatggccagggcctgccgctcaagctcgtgatgcgt
accgaccaatgcaccatggaaaacatcgccaagctgaagcaagtgttgctatccaacgcc
ggagaatccgatgtctacctcaaacttgttgacggcgagcactccacgatgatggttctc
ggcgatcacttgcgggtcaatcgcaccggcagcctcatgggtgacctcaaggccaccatg
gggccgggcatcttggggtag
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