Cellulomonas sp. JZ18: GC089_01240 Help Entry GC089_01240       CDS       T06322                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism cej  Cellulomonas sp. JZ18 Brite KEGG Orthology (KO) [BR:cej00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cej03019]     GC089_01240 (hrpA) Enzymes [BR:cej01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      GC089_01240 (hrpA) Messenger RNA biogenesis [BR:cej03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      GC089_01240 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 AAA_19 NACHT T2SSE HA2_N nSTAND3 ABC_tran DncV_C Motif Other DBs NCBI-ProteinID:  QGQ18143 UniProt:  A0A6I5ZX92 LinkDB All DBs Position 264283..268731 Genome browser AA seq 1482 aa AA seqDB search MSTTDPTPATDERAPRRPRGRRGRGRGEGGRPDGERREERRARDEQRLAQAAERRAAVQV PAVVYPEQLPVSARRDEIAAAIRDHQVVVVAGETGSGKTTQLPKIMLELGRGRAGQIGHT QPRRIAARSVADRIADELGVPLGGVVGYQVRFTDESSDETLVKVMTDGILLAQIQRDPML RRYDTLIIDEAHERSLNIDFILGYLTRLLPQRPDLKVVITSATIDSARFARHFAGPPTDE HPDGVPAPVVEVSGRTYPVEIRYRPLTGEGTEDRDMVTGIVDAVDELMAEGPGDVLVFLS GEREIRDAEDALRGALGNRVTDPRHPQAVELLPLYARLSAAEQRRVFERHDTRRVVLATN VAETSLTVPGITYVVDPGTARISRYSKATKVQRLPIEPISQASANQRSGRSGRLSPGIAI RLYSEEDFASRPEYTEPEILRTSLASVILQMISVGVVSSPDEVVDFPFVDPPDVRAVRDG VALLTELHALDVREGRTRLTETGRALAQIPVDPRLARMVVEAGRRGVAREVVVIAAALSI QDPRERPAEQRETADQLHRRFADPNSDLLSYLNLWTYLREQQRVLSGSAFRRMCKAEHLH YLRVREWQDVVTQLRDLTKPLGIEAKGAPTPVSDEVVAARAAAETAGRDGGRGRRGPAGA PVQDVTPPSDEPATPGGTADETRTRWAWDGDAIHQAVLSGLLSQVGMQLVTEVQATGKDA KGKGRAASDRRARNEYLGARGARFAIFPGSALARRPPSWVMAAELVETSRLWARDAARIK PEWAEELGAHLVKRTYSDPAWSTRQGAAMVNEKVLLYGVPIVSQRRVLLGTVDPAGAREL FLRHALVQGEWTTHHAFFHENRRLLAEVGDLEARTRSRLVVDDDVLFDFYDERVPDDVVS ARHFDRWWKDARRRDPDLLTFTRELLVGSDTAVDESQFPSRWPQGELSFPLTYQFQPGTE ADGVTVHIPLPQLPRVRPEGFDWMVPGLRAELLTATIRALPKAVRVQLVPAPDVARAVDA WMSEHVASWEDTVRAADAAPSFREMFARAVRALRDVDVPPDAVEEDRLPAHLRMTFRVVG ERGGVVDEGKDLVLLQRRNAGRAQDAVSSAVRSAVRAAMEEAMAAAGGGAGASASGAGPT ADGDASASGARGRDGRGPDARRGAGPRPGDRRGAPTAPDIERTGLTTWPDLPGPLPEVVE APSAAGGVVRAYPTLVEETAGGRASVALRVLADATAAEAAAGRGLRRLLVLDVGLAPARV TSRWTGTQALALAASPYPSTDALVTDVQLASVDRLMARHLGGRSPREVRDADAYAALQAA VRAGLEDDVHRVVGDLVTVLGAWRELDGDVRGVSSLALLSTAQDVREQSAALVHDGFVSE VGADRLPQLVRYLRAARHRLAKAAENPQRDADLAWQVHDVLEQYRAARTRLAAGAPDPGR ARALDDVRWLVEELRVSLFAQQLGTPVPVSPTRIRKALAALG NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt gtgagcacgacggaccccacccccgccacggacgagcgcgccccgcgccggccgcggggc cgtcgcggccgcggtcggggcgagggcgggcggccggacggcgagcgccgcgaggagcgc cgggcgcgcgacgagcagcggctcgcgcaggccgccgagcggcgtgccgcggtgcaggtg ccggccgtcgtctaccccgagcagctgccggtctcggcgcgccgggacgagatcgccgcc gcgatccgcgaccaccaggtcgtcgtcgtcgcgggcgagacgggctcgggcaagacgacg cagctgccgaagatcatgctcgagctgggccggggccgggccgggcagatcggccacacg cagccgcgccggatcgcggcgcgctcggtcgcggaccgcatcgccgacgagctcggcgtg cccctcggcggcgtcgtcgggtaccaggtgcggttcaccgacgagtcgtccgacgagacg ctcgtcaaggtgatgacggacggcatcctgctcgcgcagatccagcgcgacccgatgctg cgccgctacgacacgctcatcatcgacgaggcgcacgagcgcagcctcaacatcgacttc atcctcgggtacctcacgcggctgctgccgcagcggcccgacctcaaggtggtcatcacc tccgcgacgatcgacagcgcgcggttcgcgcggcacttcgcgggcccgcccaccgacgag caccccgacggcgtgccggcccccgtggtggaggtcagcgggcgcacgtaccccgtcgag atccggtaccggcccctgacgggcgagggcaccgaggaccgcgacatggtcacgggcatc gtcgacgccgtcgacgagctcatggccgagggcccgggcgacgtgctggtgttcctgtcc ggcgagcgggagatccgcgacgccgaggacgcgctgcgcggcgcgctcggcaaccgcgtg accgacccgcggcacccgcaggccgtcgagctgctgccgctgtacgcgcgcctgtccgcg gccgagcagcgccgcgtgttcgagcggcacgacacccggcgcgtcgtgctcgcgacgaac gtcgcggagacgtcgctgaccgtccccggcatcacctacgtcgtcgaccccggcaccgcg cgcatctcgcggtactcgaaggcgacgaaggtccagcggctgccgatcgagccgatctcg caggcgtcggccaaccagcgctccgggcgctcgggacgcctctcgccgggcatcgccatc cgcctgtactcggaggaggacttcgcgtcccggccggagtacaccgagccggagatcctg cgcacgtcgctggcgtccgtgatcctgcagatgatctcggtcggggtcgtgagcagcccc gacgaggtcgtcgacttcccgttcgtcgacccgccggacgtgcgggccgtgcgcgacggc gtcgcgctgctgaccgagctgcacgcgctcgacgtccgcgagggacgcacccgcctgacc gagaccgggcgcgcgctcgcccagatccccgtggacccgcgcctcgcgcggatggtcgtc gaggccgggcggcgcggggtcgcgcgcgaggtcgtcgtcatcgccgccgcgctgtccatc caggacccgcgcgagcgtcccgcggagcagcgcgagacggccgaccagctgcaccgccgg ttcgccgacccgaacagcgacctgctcagctacctgaacctgtggacgtacctgcgcgag cagcagcgggtcctctcggggtcggcgttccgccgcatgtgcaaggccgagcacctgcac tacctgcgggtgcgcgagtggcaggacgtcgtcacccagctgcgcgacctcaccaagccg ctcggcatcgaggcgaagggcgcgccgacgccggtgtcggacgaggtcgtcgccgcgcgc gcggcggcggagacggccggacgggacggcgggcgggggcggcgcggccccgccggtgcg ccggtgcaggacgtcacgccgccgtcggacgagccggcgacgcccggcggcaccgccgac gagacgcggacgcgctgggcgtgggacggcgacgcgatccaccaggccgtgctgtcgggg ctgctctcgcaggtcggcatgcagctcgtcaccgaggtgcaggcgaccggcaaggacgcg aagggcaagggccgggccgcgtcggaccgccgcgcccgcaacgagtacctgggtgcccgc ggcgcccggttcgcgatcttccccggctccgccctcgcgaggcggccgccgtcgtgggtg atggccgccgagctcgtcgagacctcacgcctgtgggcgcgcgacgcggcgcgcatcaag cccgagtgggcggaggagctcggcgcgcacctggtgaagcgcacgtactccgaccccgcg tggtcgacccgccagggcgcggcgatggtcaacgagaaggtgctgctctacggcgtgccg atcgtgtcccagcggcgcgtcctgctcggcacggtcgacccggcgggggcgcgcgagctg ttcctgcggcacgcgctcgtgcagggggagtggacgacgcaccacgcgttcttccacgag aaccggcgcctgctcgccgaggtcggcgacctcgaggcgcgcacgcgcagccgcctcgtc gtcgacgacgacgtgctgttcgacttctacgacgagcgcgtccccgacgacgtcgtctcc gcccggcacttcgaccggtggtggaaggacgcgcgccgccgcgaccccgacctgctgacg ttcacgcgcgagctgctcgtcgggtccgacacggccgtcgacgagtcgcagttcccgtcc cgctggccgcagggcgagctgtcgttcccgctgacgtaccagttccagccgggcaccgag gccgacggcgtgaccgtgcacatcccgctgccgcagctgccgcgcgtgcgtcccgagggc ttcgactggatggtgccggggctgcgcgccgagctgctgaccgcgacgatccgcgcgctg cccaaggccgtgcgcgtgcagctggtccccgcgccggacgtggcgcgtgccgtcgacgcg tggatgagcgagcacgtcgcgtcctgggaggacaccgtgcgcgccgccgacgcggcaccg tcgttccgcgagatgttcgcccgggccgtgcgggcgctgcgcgacgtcgacgtgccgccg gacgccgtcgaggaggaccgtctgcccgcccacctgcggatgacgttccgcgtcgtgggg gagcgcggcggggtcgtcgacgagggcaaggacctggtgctgctgcagcggcgcaacgcc ggccgcgcgcaggacgcggtgtcgtcggccgtgcgcagcgcggtgcgcgcggccatggag gaggcgatggccgccgcgggcggcggtgccggtgcgtccgcgtcgggggcagggccgacc gccgacggcgacgcctccgcctcgggggcgcgcggacgggacgggcgcggtccggacgcg cgccggggtgccggtccgcgtcccggtgaccggcgcggcgcgcccacggcaccggacatc gagcgcacgggcctgacgacctggccggacctgccgggtccgctgccggaggtcgtcgag gcgccgtccgccgccggcggggtcgtgcgcgcgtacccgacgctcgtcgaggagaccgcc ggcggtcgggcgtccgtggcgctgcgcgtcctcgcggacgcgacggcggccgaggccgcg gcggggcgcggcctgcgccggctgctcgtcctcgacgtcggcctggcgccggcgcgcgtg acgagccggtggacgggcacgcaggcgctcgcgctcgcggcgtcgccgtacccctcgacg gacgcgctggtcaccgacgtgcagctcgcgtcggtggaccggctcatggcgcgccacctc ggtggccggtcgccgcgcgaggtccgggacgccgacgcgtacgcggcgctgcaggcggcc gtgcgcgcgggtctcgaggacgacgtgcaccgggtggtcggggacctcgtcaccgtgctc ggtgcgtggcgcgagctcgacggcgacgtgcggggcgtcagcagcctcgcgctgctgtcg accgcgcaggacgtgcgcgagcagtccgccgcgctcgtgcacgacgggttcgtgtccgag gtcggcgccgaccgcctgccgcagctcgtgcgctacctgcgcgcggcccggcaccggctg gcgaaggccgcggagaacccgcagcgcgacgccgacctcgcgtggcaggtgcacgacgtg ctggagcagtaccgggcggcacgcacccggctcgctgccggtgcgcccgacccggggcgg gcgcgggcgctggacgacgtgcgctggctggtcgaggagctgcgggtgagcctgttcgcc cagcagctcggcacgccggtcccggtctcgccgacgcgcatccgcaaggccctcgcggcg ctgggctga

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