Cellulomonas sp. JZ18: GC089_04565
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Entry
GC089_04565 CDS
T06322
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cej
Cellulomonas sp. JZ18
Pathway
cej03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GC089_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cej03021
]
GC089_04565
03400 DNA repair and recombination proteins [BR:
cej03400
]
GC089_04565
Enzymes [BR:
cej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GC089_04565
Transcription machinery [BR:
cej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GC089_04565
DNA repair and recombination proteins [BR:
cej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GC089_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BssS
Cluap1
Motif
Other DBs
NCBI-ProteinID:
QGQ18649
UniProt:
A0A6I5ZZ73
LinkDB
All DBs
Position
981874..985743
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEDGRAEDLPNLQNEIDLEKKEIADRRDNDINARAQKLEAD
LAELEAEGAKADARRKVRDSAEREMAQLRKRADAELDRLEQVWDRFKNLKVADLEGDEML
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLEAEAEALRETIRSGKGQRKTRALKRLKVVN
AFLTTNNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDKEDALGAGR
AFSSVSEAIMAFDQGTLDLNAVVKIRFDDLVLGEDEAPEGWEPGQTLLFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKEAGFRWATRSGVTIAISD
VATPAAKKEILEEHEAKAAKVQGQYDKGLITDDERRQELIEIWTNATDKVAKAMQANFPA
RNTVFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKANYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTMPIGVATADGTLRRHDK
VETSVYSRTLATDVSIGDEVIGRAGDDVGDVLLDRLLEAGVTELKIRSVLTCESRVGTCA
KCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQEL
FEARTPKGEAPIAEFSGRVSIEEGDRSRRIVLTPDDGSEEIAYPITKRSRLLVQDGDHVA
VGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRRVT
VLDSGETDLLPGELAERGRFEDANRKAVSEGGQPASGRPELMGITKASLATDSWLSAASF
QETTKVLTEAAMSSRSDPLLGLKENVILGKLIPAGTGLARYRNVEVEATEEAKAELYPAF
GYDEIDFPALGLGSGEAIPLEDIDFGDYR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggccacggccgacgacatc
cgtgcctggtcgcacggcgaggtgaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggacggtctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctcgaaggtgcgccgtgagcgcatggggcacatcgagctggccgccccg
gtcacgcacatctggttcttcaagggtgtgcccagccggctcggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggacggccgggccgaggacctccccaacctccagaacgagatcgacctggagaagaag
gagatcgcggaccgccgcgacaacgacatcaacgcccgcgcccagaagctcgaggccgac
ctggccgagctcgaggccgagggcgcgaaggccgacgcccgccgcaaggtgcgcgactcc
gccgagcgcgagatggcgcagctgcgcaagcgtgccgacgcggagctcgaccgcctcgag
caggtgtgggaccgcttcaagaacctcaaggtcgcggacctcgagggcgacgagatgctg
taccgccagctgcaggaccggtacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgcctcgaggcgttcgacctggaggccgaggccgaggcgctgcgcgagacg
atccgctcgggcaagggccagcgcaagacgcgtgccctcaagcgcctgaaggtcgtcaac
gcgttcctcacgacgaacaactcgccgaccggcatggtcctcgacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctcgacggtggccgcttcgccacgtcggacctc
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctggacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgcgcccgc
ccggtcgtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctggtcgagggcaag
gccatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcggaggcgcaggccgaggcccgcatcctcatgctg
tcgagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggcctgtaccacctgacgagcgacaaggaggacgcgctcggcgcgggccgc
gcgttcagctcggtctccgaggcgatcatggcgttcgaccagggcaccctggacctgaac
gccgtggtgaagatccgcttcgacgacctcgtgctcggtgaggacgaggcgcccgagggc
tgggagccgggtcagacgctgctgttcgagacgaccctcggccgtgcgctcttcaacgag
ctcctgccggtggactacccgtacgagaacggcgtcgtcgacaagaagcgcctgtcggtc
atcgtcaacgacctggccgagcggtacccgaaggtcgaggtcgccgcgtcgctcgacgcc
ctgaaggaggccggcttccgctgggccacccgctcgggcgtcacgatcgccatctcggac
gtcgccacgccggcggccaagaaggagatcctcgaggagcacgaggcgaaggccgccaag
gtgcagggccagtacgacaagggcctcatcaccgacgacgagcgtcgccaggagctcatc
gagatctggacgaacgccaccgacaaggtcgcgaaggcgatgcaggccaacttcccggcc
cgcaacaccgtcttccgcatggtcggctcgggtgcgcgaggcaactggatgcaggtccgc
cagatcgcgggcatgcgtggtctcgtcgccaacccgaagggcgagatcatcccgcggccg
atcaaggcgaactaccgcgagggcctgtccgtcctcgagtacttcatcgcgacgcacggc
gcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggctacctcacgcgt
cgtctggtggacgtctcgcaggacgtcatcgtccgcgaggaggactgcggcaccgagcgc
ggcctgaccatgccgatcggcgtggcgaccgcggacggcacgctgcgccggcacgacaag
gtggagacgtccgtgtactcgcggacgctcgccacggacgtgtcgatcggcgacgaggtc
atcggccgcgccggtgacgacgtcggcgacgtcctgctcgaccggctgctcgaggcgggc
gtcacggagctcaagatccgctccgtgctcacctgcgagtcgcgcgtcggcacgtgcgcc
aagtgctacggccgctcgctcgcgaccggcaagctcgtcgacatcggtgaggccgtcggc
atcatcgcggcccagtcgatcggtgagcccggcacccagctgacgatgcgcacgttccac
accggtggtgtggcctcggcggacgacatcacgcagggtctgccgcgtgtccaggagctc
ttcgaggcccgtacccccaagggtgaggcgccgatcgcggagttctcgggccgggtgtcg
atcgaggagggtgaccgctcgcggcgcatcgtcctgacgccggacgacggctcggaggag
atcgcgtacccgatcacgaagcgctcgcgcctgctcgtgcaggacggcgaccacgtcgcg
gtcggcacgcagctcgtccagggtgcggtggacccgaagaaggtcctgcgcatcctcggc
ccgcgtgcgacgcagaagcacctggtggacgaggtccaggaggtctaccgctcgcagggc
gtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgccgcgtgacg
gtcctcgactcgggcgagacggacctgctgcccggcgagctcgccgagcgcggccgcttc
gaggacgcgaaccgcaaggccgtgtccgagggtggccagccggcctcgggtcgtccggag
ctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctctccgccgcctccttc
caggagacgacgaaggtgctcaccgaggccgcgatgtcgagccggtcggacccgctgctg
ggcctgaaggagaacgtcatcctcggcaagctcatcccggcgggtacgggcctggcccgc
taccgcaacgtcgaggtggaggcgaccgaggaggcgaaggccgagctgtacccggccttc
ggctacgacgagatcgacttccccgccctgggcctcggctcgggcgaggcgatcccgctc
gaggacatcgacttcggcgactaccgctga
DBGET
integrated database retrieval system
