Cellulomonas sp. JZ18: GC089_05730
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Entry
GC089_05730 CDS
T06322
Name
(GenBank) AlkA protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cej
Cellulomonas sp. JZ18
Pathway
cej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GC089_05730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cej03000
]
GC089_05730
03400 DNA repair and recombination proteins [BR:
cej03400
]
GC089_05730
Enzymes [BR:
cej01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GC089_05730
Transcription factors [BR:
cej03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GC089_05730
DNA repair and recombination proteins [BR:
cej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GC089_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QGQ18833
UniProt:
A0A6I5ZZ09
LinkDB
All DBs
Position
complement(1241463..1242389)
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AA seq
308 aa
AA seq
DB search
MRTAGSAGWTPAPARVSAPARTVAGVHAAARLDPLPALSSVAARAVPGVEEVDAAAGTVR
RLVDLGAGPVPVTVTLAPDGATAQVAGPGTPPDGTDAALRRLLARWFGVDDDLDAVHAAL
GADPVLGPLLRTRPHLRVLGHPDGFEAAVQAVLTQQVSLRAGRTLGARLAEAYGRPHPSG
LRAYPTPEAVAAADPVTLQAVLRVPHARAGAVHAIAVACADGLALAPGADVGQVRRALLA
LRGVGPWTADVVALRALGDRDAFPSGDLVLRRALAVPHARDVAAAGLAWAGWRGWAATHL
WASVGYAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggccggctccgcagggtggacgccggctccggcccgggtgtcggcaccggcc
cgtaccgtggcgggcgtgcacgccgccgcccgcctcgacccgctccccgcgctgtcctcg
gtcgccgcacgggccgtgccgggggtcgaggaggtcgacgccgccgcggggacggtgcgg
cggctggtcgacctgggggccggccccgtcccggtgaccgtgaccctggcaccggacggt
gccacggcacaggtggcgggcccgggcacgcccccggacggcaccgacgcggccctgcgt
cgcctgctggcgcgctggttcggcgtcgacgacgacctcgacgcggtgcacgccgcgctc
ggcgccgacccggtgctcggccccctgctgcgcacccgtccgcacctgcgggtgctcggg
cacccggacggcttcgaggccgcggtgcaggcggtgctgacgcagcaggtgtcgctgcgc
gcggggcgcacgctgggtgcccgcctggccgaggcctacgggcggccccacccgagcggt
ctgcgcgcgtaccccacgccggaggcggtcgcggcggccgaccccgtgacgctgcaggcg
gtcctgcgcgtgccgcacgcccgcgccggcgccgtgcacgcgatcgcggtcgcgtgcgcc
gacgggctcgcgctggcgcccggcgccgacgtggggcaggtgcgacgcgcgctgctcgcg
ctgcgcggtgtcgggccgtggacggcggacgtggtcgcgctgcgggccctcggcgaccgc
gacgccttcccgtcgggcgacctggtgctgcgccgggcgctggcggtgccgcacgcgcgc
gacgtcgctgcggcgggtctggcgtgggcggggtggcgggggtgggccgcgacgcacctg
tgggcgtccgtgggctacgcggactga
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