Cellulomonas sp. JZ18: GC089_08855
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Entry
GC089_08855 CDS
T06322
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cej
Cellulomonas sp. JZ18
Pathway
cej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GC089_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cej03019
]
GC089_08855
03009 Ribosome biogenesis [BR:
cej03009
]
GC089_08855
Enzymes [BR:
cej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GC089_08855
Messenger RNA biogenesis [BR:
cej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GC089_08855
Ribosome biogenesis [BR:
cej03009
]
Prokaryotic type
rRNA helicases
GC089_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QGQ19321
UniProt:
A0A6I6A1V3
LinkDB
All DBs
Position
complement(1951670..1953445)
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AA seq
591 aa
AA seq
DB search
MTLLHSPLPSTDDAAPAAAGSFADLGLSPELLAAVTDLGFTAPTPVQARTVPALLAGRDV
VGVAQTGTGKTAAFGLPLLQRVDPSVPAVQAVVLTPTRELAMQVADAITSFARHREGLQV
VPVYGGSPYLPQQRALARGAQVVVGTPGRVIDHLDRGTLKLQDVRFLVLDEADEMLRMGF
AEDVERVLSQTPAGRQVALFSATMPAPIRRVADQHLSDPVEVAVARQSSTVTAITQQYAV
VPHRHKAGALARVLAVSDADAAIVFVRTREAAEEVGNLLVQRQIAAAHISGDVAQADRER
IVERLRTGALDVLVATDVAARGLDVERIGLVVNMDVPREAETYVHRIGRTGRAGRTGAAL
TFVTPNERGKLRQIERTTRTPLVETTIPSPAEVSAHRVARLLARTPERLAAGRLELYREA
VGAHLAEHPEVDVTDLLAAVAALAVGDEGPAPRTGDGDDLDDAVRRARETPDDGRTAGAG
HGTAGRRRATTGGPSGRPRYRVAVGHRDGVQAGQLVGALTGEGGLQGSDVGRIDIFHTFA
LVDIPAGLSPEAVDRIGRARVAGRPLRIRVDTGPRADRHPSRGEKVRRAHV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgctgcactcccccctgccctccaccgacgacgccgctcccgctgcggccggc
tcgttcgccgacctcggtctgtcccccgagctcctcgccgcggtcaccgacctcggtttc
acggcccccacgcccgtccaggcgcgcacggtgccggcgctgctcgccggccgcgacgtc
gtcggcgtcgcgcagaccggcaccggcaagaccgcggccttcggtctgcccctcctccag
cgggtcgacccgtcggtcccggccgtccaggcggtcgtgctgaccccgacgcgcgagctc
gcgatgcaggtggcggacgccatcacgtcgttcgcccggcaccgcgaggggctgcaggtc
gtccccgtctacggcggctccccctacctgccgcagcagcgcgcgctcgcgcgcggcgcc
caggtcgtcgtcggcacgcccggccgcgtcatcgaccacctggaccgcggcacgctgaag
ctgcaggacgtgcgcttcctcgtgctggacgaggccgacgagatgctgcgcatgggcttc
gcggaggacgtcgagcgcgtgctgtcgcagacgcccgcgggtcggcaggtcgcgctgttc
tcggccaccatgccggcacccatccgccgcgtggccgaccagcacctgagcgacccggtc
gaggtggcggtcgcccgccagtcgtccacggtcacggcgatcacgcagcagtacgccgtg
gtgccgcaccggcacaaggcgggcgcgctcgcgcgcgtcctcgcggtgagcgacgccgac
gccgccatcgtcttcgtgcgcacgcgcgaggcggcggaggaggtcgggaacctgctcgtg
cagcgccagatcgccgcggcgcacatctccggcgacgtcgcccaggcggaccgggagcgc
atcgtcgagcggctgcgcacgggcgcgctcgacgtgctcgtcgccaccgacgtggcggcc
cgcggtctcgacgtcgagcggatcgggctcgtcgtcaacatggacgtcccgcgcgaggcg
gagacctacgtgcaccgcatcggccgcacggggcgcgccggtcgcacgggtgccgcgctg
accttcgtcacgccgaacgagcgcggcaagctgcgccagatcgagcggacgacccgcacc
cccctggtcgagacgaccatcccgtccccggccgaggtgtcggcgcaccgggtcgcccgc
ctcctggcgcgcacgcccgagcgcctggccgccggccgtctggagctgtaccgcgaggcc
gtcggtgcgcacctggccgagcatcccgaggtcgacgtgaccgacctgctcgccgcggtc
gcggcactcgcggtcggcgacgagggcccggcgccgcgcacgggcgacggcgacgacctc
gacgacgcggtgcgccgcgcccgagagacgcccgacgacgggcgcacggcgggggccggt
cacggcacggcgggtcgccgtcgcgcgacgaccggcggtcccagcgggcggccgcgctac
cgggtcgccgtgggccaccgcgacggcgtgcaggcggggcagctcgtcggtgccctgacc
ggcgagggcgggctgcagggctccgacgtcgggcggatcgacatcttccacacgttcgcc
ctggtcgacatcccggcgggcctgtcgcccgaggcggtcgaccgcatcgggcgcgcccgc
gtggcggggcgcccgctgcggatccgggtcgacaccggcccccgcgccgaccggcacccc
agccgcggcgagaaggtgcgccgggcgcacgtctga
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