Cellulomonas sp. JZ18: GC089_10440
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Entry
GC089_10440 CDS
T06322
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cej
Cellulomonas sp. JZ18
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cej03016
]
GC089_10440 (thpR)
Enzymes [BR:
cej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GC089_10440 (thpR)
Transfer RNA biogenesis [BR:
cej03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GC089_10440 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-ProteinID:
QGQ19566
UniProt:
A0A6I6A0D6
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All DBs
Position
complement(2303770..2304408)
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AA seq
212 aa
AA seq
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MRLFAAVWPPADVLDHLDLALAAVRPRGGPEEPVRWTARDAWHLTAAFYGAVPDALADDL
AADLEALAGVTAPFELALRGAGVFSHRTLWVGVGGDVDAMSRLSAGARAVGDALGARPDD
RPRNRPHLTVGRARPGSRPPRRRGAPHGARGPGGRTAAAGEPDPVDALAQALAVYDGPAW
QVAAVTLVESRPGEGRGGGPLYRTVGEWALGG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttcgcggcggtgtggcccccggccgacgtcctggaccacctggacctcgcg
ctcgccgcggtgcgcccacggggagggcccgaggagcccgtccgctggacggcccgcgac
gcctggcacctgaccgccgcgttctacggcgcggtgcccgacgcgctggccgacgacctc
gccgccgacctggaggcgctggccggggtgacggcgccgttcgagctcgcgctgcgcggg
gccggcgtcttctcccaccggaccctgtgggtcggcgtggggggcgacgtggacgccatg
tcccggctgtccgcgggtgcgcgggcggtcggcgacgcgctgggcgcgcgtccggacgac
cgtcctcgcaaccggccgcacctgaccgtcggacgtgcgcgcccggggtcgcgtcccccg
cgccggcgcggggcaccgcacggcgcgcgcggccccggcgggcgcaccgccgcggccggt
gagccggaccccgtcgacgccctggcgcaggcgctcgccgtgtacgacggtcccgcgtgg
caggtcgcggcggtgacgctcgtcgagtcccgcccgggcgaggggcgcggcggggggccg
ctgtaccgcacggtgggggagtgggcgctggggggatga
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