Cellulomonas sp. JZ18: GC089_13335
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Entry
GC089_13335 CDS
T06322
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cej
Cellulomonas sp. JZ18
Pathway
cej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GC089_13335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cej03021
]
GC089_13335
03019 Messenger RNA biogenesis [BR:
cej03019
]
GC089_13335
Transcription machinery [BR:
cej03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GC089_13335
Messenger RNA biogenesis [BR:
cej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GC089_13335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGQ20009
UniProt:
A0A6I6A3J2
LinkDB
All DBs
Position
complement(2945975..2948068)
Genome browser
AA seq
697 aa
AA seq
DB search
MTDTIDAAATTGTISAMRLPELQALAVQLGVKGTSKMRKGDLVQAISAARSGDRPAASAP
SAPAAEAGATASRTEDDGAQAPARAPRRERAPRAERVRAERPQGEDAAPADAPQADAPRT
DAATAAAPAGAGATPTDAPPAEPRQARRTRGDRSEQGEDDRPARGDRDALAGLEAALDAR
MGAGDERDDRARAGESGGRRSRRAGRDAGAPVDAAPREEQGERPADLRRGDRPQQVRDAQ
PAQQERADRQGRPDRDDRQDEGDERGGRRRRSRDRYRERDRKRGRGRGQGELAGLDEVEL
DEDDVLLPVAGVLDVLESYAFVRTSGYLPGPGDVYVSLNQVKKYGLRRGDAVAGAVRQPR
EGDPQPQGNRPSKFNALVRLDSVNGMSPEEARQRPEFTKLTPLYPQERLRLETEPGRLTP
RVIDIVAPIGKGQRGLIVAPPKAGKTIVMQQIANAITANNPEVHLMVVLVDERPEEVTDM
QRTVKGEVIASTFDRPASDHTIVAELAIERAKRLVELGQDVVVLLDSLTRLSRAYNLAAP
ASGRILSGGVDASALYPPKRFFGAARNIEHGGSLTILASALVETGSKMDEVIFEEFKGTG
NMELRLSRQLADKRIFPAVDVNASGTRREEVLMSGDELKIVYKLRRVLGALDQQQAIELL
LGKLRETKSNVEFLLQVQKTTPGTNGHGLEEGVGKVV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccatcgacgccgcggcgaccaccggcaccatctccgcgatgcggctgccg
gagctccaggcgctggccgtgcagctcggcgtcaagggcacgagcaagatgcgcaagggt
gacctcgtgcaggcgatctccgccgcgcgatcgggcgaccgtcccgccgcgagcgcgccg
tcggcgcccgccgccgaggccggcgccaccgcctcgcgcaccgaggacgacggcgcgcag
gcgcccgcccgcgcaccgcgccgtgagcgcgccccccgtgccgagcgggtccgcgccgag
cggccgcagggtgaggacgccgcgcccgccgacgcgccgcaggccgacgccccccgcacg
gacgcggcgaccgccgccgcgccggccggtgccggcgccacgccgaccgacgcgccgccg
gcggagccgcggcaggcccggcgcacccggggcgaccgctccgagcagggtgaggacgac
cgcccggcgcgcggcgaccgtgacgcgctcgccggcctcgaggccgcgctggacgcgcgc
atgggtgccggcgacgagcgcgacgaccgcgcccgcgccggcgagagcggcgggcgccgc
tcgcgtcgcgccggccgtgacgccggggcgcccgtcgacgccgcaccgcgcgaggagcag
ggcgagcgccccgcggatctgcggcgtggcgaccgtccgcagcaggtgcgcgacgcccag
ccggcgcagcaggagcgcgccgaccggcagggccggccggaccgtgacgaccgccaggac
gagggcgacgagcgcggtggccgccggcgccgctcgcgcgaccggtaccgcgagcgcgac
cgcaagcgcggccgcggccgtggccagggcgagctggcgggtctcgacgaggtcgagctc
gacgaggacgacgtcctgctgcccgtcgcgggcgtgctcgacgtgctcgagtcctacgcc
ttcgtgcgcacctccggctacctgcccggtccgggcgacgtctacgtctcgctcaaccag
gtgaagaagtacggcctgcgccgcggcgacgccgtcgccggggcggtgcgccagccgcgc
gagggcgacccgcagccgcagggcaaccgcccgagcaagttcaacgcgctcgtgcggctc
gactcggtcaacggcatgagcccggaggaggcgcgccagcgcccggagttcaccaagctc
acgccgctgtacccgcaggagcgcctgcgcctggagaccgagccgggccggctcacgccc
cgcgtcatcgacatcgtcgcccccatcggcaagggccagcgcggcctcatcgtcgcgccg
cccaaggcgggcaagacgatcgtcatgcagcagatcgcgaacgcgatcaccgcgaacaac
cccgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaggaggtcacggacatg
cagcggacggtgaagggcgaggtcatcgcctcgaccttcgaccggcccgcgtccgaccac
acgatcgtcgccgagctcgcgatcgagcgggccaagcgcctggtggagctcggccaggac
gtcgtcgtgctgctcgactcgctgacccgcctctcgcgggcctacaacctggccgcgccg
gcgtccgggcgcatcctgtccggtggtgtggacgcctcggcgctctacccgccgaagcgg
ttcttcggcgccgcgcgcaacatcgagcacggcggctccctgacgatcctcgcctcggcc
ctggtcgagacggggtcgaagatggacgaggtcatcttcgaggagttcaagggcaccggg
aacatggagctgcgcctgtcgcgccagctcgccgacaagcgcatcttcccggcggtggac
gtgaacgcgtccggcacccgccgcgaggaggtgctcatgagcggcgacgagctgaagatc
gtctacaagctgcgccgcgtcctcggcgcgctggaccagcagcaggcgatcgagctgctg
ctcggcaagctgcgcgagacgaagtcgaacgtcgagttcctgctccaggtgcagaagacg
acgccgggcaccaacggccacgggctcgaggagggcgtgggcaaggtcgtctga
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