Cellulomonas sp. JZ18: GC089_15990
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Entry
GC089_15990 CDS
T06322
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cej
Cellulomonas sp. JZ18
Brite
KEGG Orthology (KO) [BR:
cej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cej03032
]
GC089_15990 (topA)
03400 DNA repair and recombination proteins [BR:
cej03400
]
GC089_15990 (topA)
Enzymes [BR:
cej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GC089_15990 (topA)
DNA replication proteins [BR:
cej03032
]
Prokaryotic type
DNA Topoisomerases
GC089_15990 (topA)
DNA repair and recombination proteins [BR:
cej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GC089_15990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
QGQ20415
UniProt:
A0A6I6A4Z0
LinkDB
All DBs
Position
complement(3546341..3549079)
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AA seq
912 aa
AA seq
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MSAGRKLVIVESPAKARTIAGYLGEGYDVEASVGHIRDLPQPSELPAEMKKGPYGKFAVD
VEHGFQPYYVVDADKKKKVAELKKLLKESDELYLATDEDREGEAIAWHLLAELKPKVPVK
RMVFHEITREAITRALQNTRELDERLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSAGR
VQSVATRLVVERERERMAFVAADYWDVVGTFAVQDAGEPRFSARLTGVGGQRVASGRDFD
DRGQLRTRDAVALDEERAHALVAGLADADFTVRSLETKPYTRRPAAPFTTSTLQQEASRK
LRMSSRQAMRTAQSLYENGYITYMRTDSPTLSTQAVDAARRQAAELYGAEYVPDAPRVYA
SKAKGAQEAHEAIRPAGDHFRTPAQVARELSGDQFRLYELIWKRTVASQMADARGQTASV
RLAATATPAGAEPVETVFSASGTVITFRGFLAAYEEGRDVGRYDEAEASEDGARSEKDAR
LPRMAEGDPLTASDLAADGHRTSPPPRYTEASLVKALEERGIGRPSTYAATIGVIQDRGY
VTNRGQALVPSWLAFAVTRLLEENFDRLVDYSFTAEMEEDLDAIAAGQKDRVDWLTEFYF
GDRSDSPERGGLRGILENLGDIDARDVNSIDIGDGVVLRVGRYGPYLEVPGEGPDDEPRR
ASVPDDLAPDELTPAKARELLETQPDGDKVLGTDPSTGTQIVARNGRYGPYVTEVLPEPE
LDPNLSAAARKKALAAQPKPRTASLFKSMSLATVTLEDALKLMSLPRVVGVDPESGAEIT
AQNGRYGPYLKKGTDSRTLASEEQLFTVTLEEALAIYAQPKRGRGQTATPPLRELGTDPT
SGKPIVVKDGRFGAYVTDGETNRTLPKDVTPESITPEQAVELLAEKRAAGPAKKRGAARK
TTTTRKKAAAKG
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcgcaagctcgtcatcgtcgagtcacccgcgaaggcgcgcaccatcgcc
gggtacctcggcgagggctacgacgtcgaggcgtccgtcggccacatccgggacctgccg
cagccgtcggagctgccggcggagatgaagaagggcccgtacgggaagttcgcggtcgac
gtcgagcacgggttccagccgtactacgtcgtcgacgcggacaagaagaagaaggtcgcc
gagctcaagaagctcctcaaggagtccgacgagctctacctcgccaccgacgaggaccgc
gagggggaggccatcgcctggcacctgctcgcggagctcaagcccaaggtgccggtcaag
cggatggtcttccacgagatcacgcgcgaggcgatcacgcgggccctgcagaacacgcgc
gagctcgacgagcggctcgtcgacgcgcaggagacgcggcgcatcctcgaccggctgtac
gggtacgaggtcagcccggtgctgtggcgcaaggtccgccaggggctgtcggccgggcgc
gtgcagtccgtcgcgacccggctcgtggtggagcgcgagcgcgagcgcatggcgttcgtc
gccgccgactactgggacgtcgtcgggacgttcgccgtgcaggacgccggcgagccgcgg
ttcagcgcgcgcctgacgggtgtcggcgggcagcgcgtggccagcgggcgcgacttcgac
gaccgggggcagctgcgcacgcgggacgcggtcgccctcgacgaggagcgggcgcacgcg
ctcgtcgccgggctcgccgacgcggacttcacggtccgctcgctcgagaccaagccgtac
acgcgccgcccggccgccccgttcacgacgtcgacgctccagcaggaggcgtcccgcaag
ctgcggatgagctcgcggcaggcgatgcgcacggcgcagtcgctgtacgagaacggctac
atcacctacatgcggacggactcgccgacgctgtcgacgcaggcggtggacgccgcgcgc
cggcaggccgccgagctgtacggcgccgagtacgtgccggacgcgccgcgcgtgtacgcc
tccaaggcgaagggcgcgcaggaggcgcacgaggccatccgtcctgccggcgaccacttc
cgcacccccgcgcaggtggcgcgcgagctctccggtgaccagttccggctgtacgagctg
atctggaagcgcacggtcgcctcgcagatggcggacgcgcgcggtcagacggcgtcggtg
cgcctggccgcgacggcgacgcccgcgggtgccgagccggtcgagaccgtgttctccgcg
tccggcaccgtcatcacgttccgcgggttcctcgccgcgtacgaggagggccgcgacgtc
ggccgctacgacgaggccgaggcgtccgaggacggcgcgcgctccgagaaggacgcccgc
ctgccgcgcatggcggagggtgacccgctgacggcgagcgacctcgccgccgacgggcac
cgcacgtccccgccgccgcgctacaccgaggcgtcgctggtcaaggcgctcgaggagcgc
ggcatcggccgcccgtcgacgtacgccgcgacgatcggcgtgatccaggaccgcgggtac
gtgacgaaccgcggccaggcgctcgtgccgtcgtggctcgcgttcgcggtcacgcgcctg
cttgaggagaacttcgaccggctcgtggactactcgttcacggccgagatggaggaggac
ctcgacgcgatcgccgccgggcagaaggaccgcgtcgactggctgacggagttctacttc
ggcgaccgctccgactccccggagcgcggcggcctgcgcggcatcctcgagaacctcggc
gacatcgacgcgcgcgacgtcaactccatcgacatcggcgacggcgtcgtcctgcgcgtg
ggccgctacggcccctacctcgaggtgccgggcgaggggccggacgacgagccgcggcgc
gcgtccgtccccgacgacctcgcacccgacgagctcacgccggcgaaggcgcgcgagctg
ctggagacgcagcccgacggtgacaaggtgctgggcacggacccgtcgaccggcacgcag
atcgtcgcgcgcaacggccgctacggcccgtacgtcaccgaggtgctgcccgagcccgag
ctcgacccgaacctgtcggcggccgcccgcaagaaggcgctcgcggcgcagccgaagccg
cggacggcgtcgctgttcaagtcgatgtcgctggccacggtgacgctcgaggacgcgctg
aagctgatgtcgctgccgcgcgtggtcggcgtcgacccggagtcgggcgccgagatcacc
gcgcagaacggccgctacgggccgtacctgaagaagggcacggactcgcggacgctcgcg
tcggaggagcagctcttcacggtcacgctcgaggaggcgctcgcgatctacgcgcagccc
aagcgcggccgcggccagacggcgacgcccccgctgcgcgagctcggcaccgacccgacg
agcggcaagccgatcgtcgtgaaggacggccgcttcggcgcgtacgtcacggacggcgag
acgaaccgcacgctgcccaaggacgtgacgcccgagtcgatcacgcccgagcaggccgtc
gagctgctcgcggagaagcgggcggcggggccggcgaagaagcggggcgcggcgcgcaag
acgacgaccacccggaagaaggcggcggcgaagggctga
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