Cellulomonas sp. JZ18: GC089_16430
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Entry
GC089_16430 CDS
T06322
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
cej
Cellulomonas sp. JZ18
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
CLIPPER
Sigma70_r4_2
zf-HC2
HTH_23
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
QGQ20482
LinkDB
All DBs
Position
complement(3648988..3653316)
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AA seq
1442 aa
AA seq
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MRGRCRHSMTRLRPTRALFTRAGGREASAQVVPATPVRARSPHLVPSARHPFAGFFRSVA
YGTLALGTDGDRGPDVVRDGGADGGIEDDAALLRATRGGDGDAFGRLYERHAGAALVVAR
QYCDSTADAEDVVADAFAAVHRAIRGGAGPEVAFRAYLFTAVRRTAAVHRTAGRRVEPTD
DVATLETAARPVEAAEAPALAGFERSVVARAFRSLPERWQAVLWHAEVEGLTPAEIAPVL
GLSANSAAALAYRAREGLRQAYLQQHLHDPLEEGCRGVAGKLGSYVRGGLGTRDTGHVER
HLEDCGDCRALVLELGDVNHGMRAVVAPLVLGLLGLGALRHPLPLGGGLGAGTAALAAAP
SAGAVGGGAAGTAGGAGSAAAGSGAAGSGAAGGGAAGSGAAAGAASGGTAAGAGGAAGGA
AGGAAGAAGGAAGAAAGGSAVAGTAAGGLVGAVAGVASAPAGIAAVGGAAGAAAGAAATG
GVVALGGVTATAAAATVGAVAVVAAVVVGATQLLGPGAGTAGATASPTVSGTALVGTVAP
SPGTTDGVLPEPLPVPSVSPTDLPELAPEPEPEPEPGPGRAEPDDDTRVLTAPGPDVPSP
DPSAGPPPDPTPPPDPEVPPAPAVVVRYDAPVLLAGATGQQIALSVHNGGAAPAVDLLAE
VALPAGVRLEEVGGVLAFGAGFSPLVTDGWLCVTTGAHSAACTLPELAPGATARLVLHVA
VDESVPVGDHELGLRIAGRYHAWAPPPVPVRVHPSPARLVPAAEPSPVQLVAGRARTLSL
PLVNAGGAPVTAEAPATVDLDLPPGVTAEAAAPWSCTREDGRTRCRLPALGGHEATTLVL
TLTVPGGTRTGDGTVTAVLGPAPSGAAPRLGVPYTLVRPAAPVVTAPARVEVGLGPVAHL
PVDVTNHGDLAASGTVVRVTPPSGAVAVAGGACVPEGSDAVCRLPEPVLAGETVRVLVPL
TGAPGAVGELGAASVTVRADDADPSPAVLVGVRGTAPVVTLDEATAVADGDGGGVLAFVV
AVAGPAHGGAAADADDVLVRVTLPRGVTHDPGSVLPGTAGCTGGGGTVECRLGRLAAGQR
VPVQVNVHVAGALNRSAEVVATAAGATPVRASVRLVAPSAGLTPVWSGVGDLDVTEVGAP
LLVCRWGPAPCPAVHHAQDNNGLDMQPLDEAPPPGARARVPVSSETRLALPQGRPVVWAG
LYWSGVRGPRDGWSGDLATARLRAPDGTWTDVRAAADAVHEVQDDSGRRYYQSAVDVTAL
VARGGAGTWALADAAVSDGRTDREPTYYAGWSLVVVHGVEGAGRGSVTVHEGPSWVGRDV
ASPAFAFVAEAGTRARIGVVGWEGDRGSGDDRLTMSGVGALTPVRWDGSQVVGGGSRANA
FDSTATGWRWPNSLGVDAKGFAEVALTSDVATLTPTTSADQYLLGVVTVRTTAPVSLAPP
QR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgagagggcgctgccggcactccatgacgcggcttcgccccacccgcgcgcttttcacc
cgtgcgggtggacgggaggcgtccgcgcaggtcgtccctgccacccccgtgcgggcccgg
tcgccccacctcgtaccgtccgctcgccacccgttcgccgggttcttccgttcggtcgca
tatggcacccttgcgctcgggaccgacggcgacaggggtccggacgtggtgcgtgacggg
ggcgcggacggcggcatcgaggatgacgccgcgctgctgcgtgcgacgcggggcggggac
ggcgacgcgttcggccggctgtacgagcggcacgcgggtgccgcgctcgtcgtcgcgcgc
cagtactgcgactcgacggccgacgccgaggacgtcgtcgccgacgcgttcgccgccgtg
caccgcgcgatccggggcggggccgggcccgaggtcgcgttccgcgcctacctgttcacg
gcggtgcgccggacggccgcggtgcaccggaccgccggccggcgcgtcgagccgaccgac
gacgtcgccaccctggagaccgcggcgcggcccgtcgaggccgcggaggcgcccgcgctc
gccggcttcgagcgcagcgtcgtcgcccgcgcgttccgctcgctgccggagcgctggcag
gccgtcctgtggcacgcggaggtcgagggcctcacgcccgccgagatcgcccccgtgctg
gggctcagcgccaacagcgccgcggccctcgcctaccgggcccgcgaggggctgcgtcag
gcgtacctgcagcagcacctgcacgacccgctcgaggaggggtgccgcggagtcgccggc
aagctcgggtcgtacgtgcgcggcgggctcggcacgcgtgacaccgggcacgtcgagcgg
cacctggaggactgcggcgactgccgcgcgctcgtcctcgagctgggcgacgtcaaccac
ggcatgcgggccgtcgtggcgccgctcgtgctcgggctgctcgggctcggtgcgctgcgg
cacccgctgcccctgggcggcgggctcggtgcgggcaccgccgcgctcgcggccgcgccg
tcggccggcgccgtcggcggcggtgccgcgggtaccgccgggggtgccgggagcgcggcg
gccgggagtggtgcggccgggagtggtgcggccgggggcggtgccgccgggagcggggcc
gccgcgggtgcggcgagcgggggcacggcggcgggggccggcggtgccgcgggcggtgcc
gccggtggtgcggccggcgccgcagggggtgcggcgggtgccgcggcgggcgggtcggcc
gtcgcggggaccgccgccggcggcctcgtcggcgccgtcgccggcgtcgcgagcgccccg
gccgggatcgcggccgtcgggggagccgcgggcgcggccgccggtgccgcggccaccggc
ggcgtcgtcgccctgggcggggtcacggccaccgcggcagccgcgacggtcggcgcggtg
gcggtcgtcgccgccgtggtcgtcggtgcgacgcagctgctcgggcccggggcgggcacc
gccggtgcgaccgcgtcgccgaccgtctcgggcaccgcgctggtcggcaccgtcgccccg
tcgccgggcacgaccgacggggtgctccccgagccgctgcccgtcccgtcggtgagcccg
acggacctgccggagctcgcgccagagcccgagcccgagcccgagccgggtcccggccgg
gccgagccggacgacgacacccgggtgctcaccgcccccggccccgacgtccccagcccc
gacccgtcggcaggtccgccgcccgacccgacaccgccgcccgaccccgaggtgccgccc
gcgcccgccgtggtcgtccggtacgacgcgcccgtgctcctcgccggcgccaccgggcag
cagatcgcgctcagcgtgcacaacggcggcgcggcgcccgcggtcgacctgctggcggag
gtggcgctgcccgccggcgtccggctggaggaggtcggcggcgtcctcgcgttcggcgcc
ggcttctccccgctggtcaccgacggctggctgtgcgtcacgacgggtgcgcacagcgcc
gcgtgcaccctgcccgagctggcgcccggcgccacggcccggctggtgctgcacgtcgcg
gtcgacgagtccgtgcccgtcggcgaccacgagctgggcctgcgcatcgcgggccggtac
cacgcgtgggcgccgccgccggtgccggtgcgcgtccacccgtcgcccgcgcgcctcgtg
cccgccgccgagccctcgccggtccagctcgtcgcgggtcgcgcgcggacgctgagcctc
ccgctcgtcaacgccggcggcgccccggtcaccgccgaggcgcccgccaccgtcgacctc
gacctgccgcccggcgtcaccgccgaggccgccgcgccgtggtcctgcacccgcgaggac
gggcggacccggtgccgcctgccggcgctcggcggtcacgaggccacgaccctggtgctg
acgctgaccgtccccggtggcacgcgcacgggcgacggcacggtcacggccgtgctcggt
ccggctccctccggtgcggcgccgcgcctgggcgtcccgtacacgctggtgcgccccgcg
gccccggtcgtcacggcacccgcccgggtcgaggtcggcctcggtcccgtcgcgcacctc
ccggtcgacgtgaccaaccacggcgacctggcggcgagcggcaccgtggtgcgcgtgacg
ccgcccagcggggccgtggccgtcgcgggcggcgcgtgcgtccccgagggcagcgacgcc
gtgtgccggctgcccgagcccgtcctcgcgggggagaccgtacgcgtgctggtcccgctc
acgggtgcgccgggtgcggtcggcgagctcggggccgcgagcgtcaccgtgcgcgccgac
gacgccgacccgtcgcccgccgtcctcgtcggcgtccgcgggaccgcgccggtcgtcacg
ctcgacgaggcgacggccgtcgccgacggcgacggcggaggcgtcctcgcgttcgtcgtc
gcggtcgccggccccgcgcacggcggcgcggccgcggacgccgacgacgtcctggtccgc
gtgacgctgccccgcggtgtcacgcacgaccccgggtcggtgctgcccggcacggcgggg
tgcaccgggggcggcggcaccgtcgagtgccgcctgggccggctggccgccgggcagcgc
gtcccggtgcaggtgaacgtgcacgtcgcgggcgcgctgaaccgctccgcggaggtcgtc
gccaccgcggccggcgccacccccgtccgcgcgtccgtgcgtctggtcgcgccgtccgcg
ggcctgacgcccgtctggtccggcgtcggcgacctcgacgtcaccgaggtgggcgcaccg
ctgctcgtctgccgctgggggcccgcgccctgccccgcggtccaccacgcgcaggacaac
aacggcctcgacatgcagccgctcgacgaagcgccgcccccgggtgcgcgcgcccgcgtc
cccgtgtcctccgagacgcgcctggcgctgccgcaggggcggcccgtggtgtgggcgggc
ctgtactggtccggcgtgcgcggcccgcgcgacgggtggagcggcgacctcgcgacggcg
cgcctgcgcgcgccggacgggacgtggaccgacgtccgggcggcggcggacgccgtgcac
gaggtccaggacgacagcggccggcgctactaccagtccgcggtcgacgtcacggccctc
gtggcgcgcggcggggcggggacgtgggcgctcgcggacgccgcggtgagcgacggtcgc
accgaccgcgagcccacctactacgcgggctggtccctcgtggtggtgcacggcgtcgag
ggcgcgggtcgcgggtcggtgacggtgcacgagggcccgtcgtgggtcggccgcgacgtc
gcctcaccggcgttcgcgttcgtcgccgaggccggcacgcgcgcgcgcatcggcgtcgtg
ggctgggagggcgaccgcggctccggcgacgaccggctgacgatgtccggcgtcggggcg
ctcacgccggtccgctgggacgggtcgcaggtggtcggcggcggctcgcgcgcgaacgcg
ttcgactcgacggcgaccggctggcgctggcccaactccctcggcgtggacgccaagggg
ttcgccgaggtggcgctcacctccgacgtcgcgacgctgacgcccacgacgtccgccgac
cagtacctcctcggcgtcgtgacggtccgcacgaccgcaccggtgagcctcgcgccgccg
cagcgctga
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