Cellvibrio sp. KY-YJ-3: D0B88_01175
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Entry
D0B88_01175 CDS
T06234
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0B88_01175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cek02022
]
D0B88_01175
02035 Bacterial motility proteins [BR:
cek02035
]
D0B88_01175
Two-component system [BR:
cek02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D0B88_01175
Bacterial motility proteins [BR:
cek02035
]
Pilus system
Twitching motility proteins
D0B88_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_30
AAA
Sec15_C
Motif
Other DBs
NCBI-ProteinID:
QEY10983
UniProt:
A0A5J6NSH8
LinkDB
All DBs
Position
253027..254442
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AA seq
471 aa
AA seq
DB search
MTEKRALIIDDEPDIRELLEITLGRMQICTDTADSVANAKQMLANHSYDLCLTDMRLPDG
KGLEIVELIQQRYPQLPVAVITAHGSVDAAIESMKAGAFDFISKPVNLATLRKLVNTAIE
ASQLAPQPVPKLTPIIGDSKAIQDLIRSIEKLARSQAPVYISGESGSGKELVAHSIHDLG
PRANNPFIAVNCGAIPRELMESEFFGHKKGSFTGAHQDKIGLFQAAEGGTLFFDEVADLP
LDMQVKLLRAIQEKSVRPVGAAEEINTDVRILCATHKNLEEEVKEGRFRQDLFYRLNVIQ
LAVAPLRERREDIPLLTQHLLRKLATEINLPSPSISPAAQNALNNYHFPGNVRELENILE
RAFTLCESNRIDADDLQLRSTAQGLSFAAEKSFSSNFNGNKTNQQERIGVDYPARCAEYS
SLDEYLQDVEKEILCHALEQAKWNKTLAAKHLGISFRSLRYRLQKLGLDDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacgcgctctaattatcgatgacgaaccggacatccgtgaactgttggaa
attacgctcggtcgcatgcaaatttgcaccgacaccgcagactcagttgccaacgccaaa
caaatgttggccaaccacagctatgacttgtgcctgaccgatatgcgcctgcccgacggc
aaaggcttggagattgttgagttaatccaacagcgttacccacagctccctgtagcggtg
attactgctcacggcagtgtcgatgccgcgatagaatcaatgaaggcaggggcgtttgat
ttcatttccaaaccagtgaatctcgccaccttgcgcaaactggtgaatacggcaattgaa
gccagccagttagcaccacaaccagtccccaaactcacaccaattattggtgactcaaaa
gcaattcaggatttaatccgcagtattgaaaaattagcccgctcgcaagcgccggtttat
atcagcggtgaatcaggctcgggaaaggaattagtcgcccactctattcacgacctgggg
ccgcgcgcaaacaatccgtttatcgccgtcaactgcggcgcgataccgcgcgaattgatg
gagagtgaattttttggtcacaaaaaaggcagctttaccggcgcgcatcaagacaaaatt
ggtttattccaagcagccgagggcggcaccctatttttcgatgaagtcgccgatttaccg
ctggatatgcaagtcaaacttctgcgcgccattcaggagaaatcggttcgccccgtgggc
gcggcagaagaaattaataccgatgttcgtattttatgtgcgactcataaaaatcttgaa
gaggaggtcaaagaagggcgttttcgtcaggacttattttaccgcctgaatgtaattcaa
ctagctgtcgccccgctgcgcgagcgacgggaagacattcccctgctcacccaacacttg
ctgcgaaaactcgccaccgaaatcaatttgcccagccccagcatttcaccggcagcacaa
aacgcactaaacaattaccacttccccggcaatgtgcgtgagctggaaaatattcttgag
cgcgcatttacactgtgtgaaagcaatcggattgatgcagatgatttgcaactgcgcagt
acagcgcaaggcttatcctttgcggctgaaaaatcatttagcagcaactttaacggcaac
aaaaccaatcagcaggaacgcataggcgttgactatccagctcgctgcgcagagtactca
tcgctggatgaatatctgcaagatgttgaaaaagaaattctctgtcacgccctggaacaa
gccaagtggaacaaaacactcgcggcaaaacatttgggaattagctttcgctcgctgagg
taccggttgcaaaagctggggttggatgatgagtag
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