Cellvibrio sp. KY-YJ-3: D0B88_01840
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Entry
D0B88_01840 CDS
T06234
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
cek
Cellvibrio sp. KY-YJ-3
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QEY11101
UniProt:
A0A5J6NSW5
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Position
complement(392810..394438)
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AA seq
542 aa
AA seq
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MSIFKKRNPIIDSSDAALVMASLGGDRDAFCKIVARYQNLLCSLAYSSVGDLKHSEDIAQ
EAFIEAWKKLDTLNDPEKLKSWLCGILRFKASHFRRKEATQPVKGADELDELDEHASGHS
QQVKVEDAAISAQEQALLWQALEKMPDTYREPLILFYREHRSVEYVASQLDLSEDTVKQR
LSRGRKLLQKAMVIFVEDTLAKSTQGAVFTLAVMAAIGGISPPVKAAALSAGAMKTGSMF
KWASVIVVLAAFSGIVSSFFGVRAGLDQSRTQRERNSVIIYTVLFFAITIVYVVAMFGLK
HMALNDVGNAGIYAAVSQLVVLGMVLGHIILVIRMLRGMRKLRAEERLFNPQAFQGEADQ
IGAKQREYKSRFCLAGIPLLHFRFGMPEQGDKPVVGWIAGGDYAYGMLFAWGGVAIAPVS
VGIISVGLISVGAVGIGLFGLGTIGIGVIGFGASAIGYKAYATFSALGWNSAFSGIGFSI
ANEAAIGPFAFAKHINNDQAGEMVNLTIMGQSYLWILAMIAILVIVPAVLHSNKVRQRMR
EK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttaaaaaacgaaaccccatcattgattcgagcgacgccgccttggtgatg
gcctcattagggggtgatcgcgatgccttttgtaaaattgttgcgcgctaccaaaatctg
ttgtgttccctggcttattcatctgttggggacttaaaacacagtgaggacatagcacaa
gaagcatttattgaagcatggaaaaaactcgacaccctcaatgacccggaaaaattaaag
tcgtggctgtgcgggattctgcggtttaaagcgagccactttcgtcgcaaagaggcgacg
cagccggtgaagggcgccgatgaactggatgagttagatgagcatgccagtgggcattcg
cagcaggtgaaagttgaagatgcagcaatcagtgcgcaagagcaggcattgctttggcag
gcactggaaaaaatgcccgacacttatcgcgaacctttgattttgttttaccgcgaacat
cgctcggtggagtatgtcgccagtcagttagatctgtcggaagacacagtgaaacaacgc
ttgtcgcgcgggcgcaagctactgcaaaaagcgatggtgatatttgtggaggatacactc
gcaaaaagtacgcagggcgcggtgtttactctagcggtaatggcggctatcggcggtatt
tccccgccggtaaaagccgcagccttgagtgcgggcgcgatgaaaaccggctcaatgttc
aagtgggcgagcgttattgtggtattggctgctttctcgggtattgtcagttcgttcttc
ggtgtaagggcaggtcttgatcagtcacgcacacaacgcgagcgcaacagcgtgatcatt
tacaccgtacttttttttgcaatcactattgtttatgtagtggctatgtttggcttgaag
cacatggcattaaatgatgttggcaacgcgggtatttacgccgccgtttcgcaacttgta
gtgttgggcatggtgctcggtcatattattttggtgattcgtatgctacgcggaatgcgc
aagctcagggccgaggagcgattatttaatccgcaggcatttcagggtgaggcagatcaa
atcggcgcaaaacaacgggaatacaaaagtcgtttttgtctcgcgggaattcctttgctg
cattttcgttttggtatgccggagcagggcgacaaacctgtcgtaggttggattgccggt
ggcgactacgcctatggaatgttgtttgcctggggcggcgttgcgattgcacctgtcagt
gtcggcattatttctgttggtttgatcagcgtcggcgctgtgggcataggtttgtttggc
ttgggcactatcggcattggcgtcatcggctttggcgcttcagcaataggctataaagcc
tacgctactttttctgctctcggctggaacagcgcttttagcggcattggtttttccatt
gcgaatgaagcggccattgggccatttgcttttgcaaaacatatcaataacgaccaagcc
ggtgaaatggtaaacctcaccatcatgggccaaagttatctttggattttagctatgatt
gcgatattagtgattgttcctgctgttttgcattcgaataaagtgaggcagagaatgagg
gaaaaataa
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