Cellvibrio sp. KY-YJ-3: D0B88_01995
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Entry
D0B88_01995 CDS
T06234
Symbol
rfaP
Name
(GenBank) lipopolysaccharide core heptose(I) kinase RfaP
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00540
Lipopolysaccharide biosynthesis
cek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D0B88_01995 (rfaP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cek01005
]
D0B88_01995 (rfaP)
Lipopolysaccharide biosynthesis proteins [BR:
cek01005
]
Core region
D0B88_01995 (rfaP)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kdo
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Pkinase
Motif
Other DBs
NCBI-ProteinID:
QEY11129
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Position
complement(426067..428031)
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AA seq
654 aa
AA seq
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MKLALVIFRYFPFGGLQRDMLAIAQAAQTKGHQVSIFCGDWQGEKISGIDIIEIKNAGFF
NIAGVKNFVTAFQQQFQRDQFDLLVGFNKMPGLDVYFAGDSCFAHKAYSERNWVYRLAPR
SRLYLAYERAVFSEASTTQILSLVASEQILFARYYATQPERFYALPPGISARHLTCSNPR
AARNTLCHELGVTPDTKIIVCLGSGYKTKGVDISINAFAELTKIMADKIALVIVGKDDPY
TYRQQAMQAGVDSSVFFLGPRSPVGDLLHAADLLLHPARKELAGNVILEAMLCGVPVVAS
AHCGYAHYVVEQQMGELIPAKASPTAIAELVAAMLAVDAGVWRERGELFARTSDVFSRPE
VAVVALEKIASRKKNYAPVFTPGQTLTDRTVIVRDELSDEWTGQDVFTLMENMQGKIARE
MKDRQTLRFEINGRGYYRKWHRGVGWREIFKNLLQLRLPVLGATNEWKALNKLRALNIPS
LIPLAYGVRGKNPARQQSFIVTRELADVVQLDHYFEQNSVAIKPRLLILKQLALMVRALH
EAGINHRDLYLCHFMLKPESLVAGNNPEIYLIDLHRAQCRVQVPRRWQIKDLAALYYSSL
NLGFNRRDSLRFLKIYFDCPLRDILENNASLLKQVQQRALKIYWRDFGHAPASH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagccttggtgatttttcgctatttcccctttggtgggttgcagcgggatatg
ttggctattgcccaagcggcacaaacaaaaggtcatcaggtcagtattttttgtggtgac
tggcaaggtgagaaaatttccggtatcgatattatcgagattaaaaatgcaggttttttt
aatattgccggcgtgaaaaattttgttaccgcttttcaacagcaattccagcgcgatcaa
tttgatttgttggttggctttaataaaatgccggggctggatgtgtattttgctggtgac
agctgctttgcgcacaaagcttacagtgagcgcaattgggtgtatcgactggcaccgcgc
tcgcggttatatcttgcctacgagcgcgccgtattttcggaagcaagtacaacgcaaatt
ctttcattagttgccagtgaacaaatattatttgcgcgttattacgctacccagcccgaa
cgtttttatgcgctgccgccaggaatctccgccaggcatctgacgtgtagcaacccgcgt
gcagcgcgtaatacgctgtgtcatgaattgggtgtaacgcccgacactaaaattattgtg
tgtttgggttcaggttataaaaccaaaggcgtggatatcagtattaacgcgtttgcagaa
ttaaccaaaatcatggccgataaaatcgccttggtaattgtgggcaaggacgatccctac
acttatcgccagcaagcgatgcaagcaggcgttgattcaagcgtattttttcttgggccg
cgcagccccgtgggcgatttgttgcatgcggcggatttgctgttgcaccccgcgcgcaaa
gaacttgctggcaatgtgattttggaggcaatgctctgtggcgttccggtagtggcctcc
gctcactgcggctatgcgcactatgttgttgaacagcaaatgggcgagttgattccggca
aaggcatcgcctacagcgattgctgaattggtcgccgcaatgctcgcggttgacgcaggt
gtatggcgtgagcgtggagaattatttgcacggacaagcgatgtcttctcccgccctgaa
gttgccgttgtggcactggaaaaaatcgccagtaggaaaaaaaattacgctcccgttttt
actccagggcaaacgcttacagaccggactgtaattgtgcgcgacgagttgagcgatgaa
tggacaggtcaggatgtatttaccctgatggaaaatatgcagggaaaaatcgcacgcgag
atgaaagatcgtcaaaccctgcgctttgaaatcaacgggcgcggctactaccgcaaatgg
catcgcggtgtgggttggcgggaaattttcaaaaatttgctgcagttgcgcctgccggtg
ttgggtgcgacaaatgaatggaaagcgctcaacaaattgcgcgccttgaatattcccagc
ttgattccgcttgcctatggggtgcgcggtaaaaatccggcgcgccagcaatcgtttatt
gttacgcgcgagctggctgatgttgttcagctggatcactactttgagcaaaattcagtg
gcgattaagcctcggctgcttatcctcaagcagcttgcgctgatggtgcgtgcgctgcat
gaggcgggtataaaccatcgcgatttgtatctatgccactttatgctcaaacctgagtca
ttggttgcaggtaataatccagagatttatctgattgatttgcatcgcgcccagtgtcga
gtgcaagtgccgcggcgttggcaaattaaagacttggcggcgctttattactccagctta
aacctcggttttaatcgtcgcgacagcttgcggtttttgaaaatctactttgattgcccg
ctgcgcgatattctggaaaacaacgcgtcattgctgaaacaggttcaacagcgcgcgtta
aaaatttattggcgcgactttggtcatgcgccagcgtcgcattga
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