KEGG   Cellvibrio sp. KY-YJ-3: D0B88_02435
Entry
D0B88_02435       CDS       T06234                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
cek  Cellvibrio sp. KY-YJ-3
Pathway
cek03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cek00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D0B88_02435 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cek02044]
    D0B88_02435 (gspD)
Secretion system [BR:cek02044]
 Type II secretion system
  General secretion pathway protein
   D0B88_02435 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Elong-fact-P_C
Other DBs
NCBI-ProteinID: QEY11210
LinkDB
Position
complement(539558..541615)
AA seq 685 aa
MIRFHGRDNNKIIFRKAVGRLLLAALISVSGTSLAQVQAVEGQGEMRWSVNFNDTDIQDV
IKSIAGLTGKTIIIDPKVRGPIKVINTRPLNAKELYELFLASLDVHGFTAVESGNIVRVV
MNRDARQFAIPTENSIKDRDDLYITQVIPLKNTSAAKILAALRPLVPQYGHLTTYEPSNA
LIITDTRANAARISELVVQLDKIGITHTDVIPLRYANAADVVAMLTQLEKPDPNRGMTTA
PPVIVADKRTNAVVVSGDDLTRQRLKFLIDDLDRPQSKSSNVRVFYLKYAKAEDVAKVLS
GMLQSLGQGKQAEGAPANAAQPAVQADEATNSVLITADVDTMDTLLSIVDSLDIRRAQVL
VEAIIVELSSGNDKELGIEWMYRNDDAGFGGSTNSGALASVGAAAFDIEENGSSGDSLVQ
LAAGVAGIPGQLFGVGRLGGKTDFLAVLKMLQTDDSSNILSTPNLLTTDNTEASILVGEQ
VPFRTGSYSGLGNTGTTGNTGFSSPFNTINREDVGIKLQVTPHINEGDSVVLDIEQEISS
VVRNTEDGPVTSKREVKTQILSADGQTVVLGGLIKDDVLVSNSRVPVLGSIPVLGHLFRS
QTSKKVKTNLLIFIRPTIIRDDRVLTGATAEKYQAIREKQIDTRRNKGLLLNNSDIPVLP
EWEEQIERYRQSLPAEADSTEATGE
NT seq 2058 nt   +upstreamnt  +downstreamnt
gtgatccggtttcatggtcgtgacaataacaagatcatctttcgcaaagcagtggggcgc
ctgctgcttgcggcgttgatcagcgtgagtggcacctcactagcccaggtacaggcagtt
gagggtcagggtgaaatgcgctggtcggtcaactttaacgataccgatattcaggatgtg
atcaaatccatcgcgggcttgaccggtaaaaccatcatcattgaccccaaggtacgcggt
ccaatcaaggtgataaatacccgtccactgaatgccaaagagttgtatgagctcttcctt
gcctcattggatgtgcatggttttaccgcagtggagagtggcaatattgtgcgtgtggta
atgaaccgcgatgcccgccagtttgctatacccaccgaaaatagcattaaagatcgcgat
gacctgtatatcacccaggtgattccgctgaaaaataccagcgccgccaaaattctcgcc
gcattgcgcccgctggtgccgcaatacggtcacctcaccacctatgaaccgagcaacgcg
ctgattattaccgatacccgtgccaatgcggcgcgtatcagcgagttggttgtacagctc
gataaaatcggcattacccatactgatgtcattccgctgcgctacgccaatgcggctgat
gtagtggcgatgctcacccagctggaaaaacccgatcccaaccgcggtatgactaccgca
ccaccggtaattgttgccgataagcgcaccaatgccgttgttgtgagtggtgatgaccta
acccgtcagcgtctcaagtttttgatcgatgacctggatcgtccgcaatccaaaagtagc
aatgttcgtgtcttctacctgaaatatgccaaggcggaagatgtggccaaggtgctctca
gggatgttgcaaagtttaggtcagggcaagcaagcggagggtgctcccgctaacgctgcc
caacctgcggtgcaggccgatgaagcaaccaattcggtgctgatcactgctgatgtcgac
acaatggacaccttgttgtccattgtggatagcctggatatccgtcgtgcccaagtctta
gtggaggcaatcattgttgagctatccagcgggaatgataaagagctgggtattgaatgg
atgtaccgtaacgatgatgctggttttggtggttctaccaatagtggtgcgttggcctcg
gtaggggctgcggcgtttgatattgaagaaaacggctcttccggagactcattggttcaa
ttggccgccggtgtggcaggtattcccggtcagctgtttggtgttggtcgtttggggggt
aaaactgacttcttggctgtattgaaaatgctgcagaccgacgactcgagcaacattctt
tcaacaccgaatttactgactaccgacaacaccgaagcctccattctggtgggcgaacag
gttcctttcagaaccggctcctattctggtttgggtaacacgggcaccacgggaaatact
ggtttcagcagtccctttaatactatcaaccgcgaagatgtgggtatcaaattacaagtc
actccgcatatcaatgaaggtgatagcgtggtactggatattgaacaggaaatttccagt
gtggtgcgtaataccgaagatggccccgtcaccagtaaacgcgaagtaaaaacccaaatc
ctgtcggctgatggccaaaccgtggtactgggtggtttgattaaagatgatgttttggtc
tctaacagtcgtgtgccggtattgggcagcattccggttctcgggcatttattccgcagc
cagacctccaaaaaagtaaaaactaacctgttgattttcattcgcccaaccattattcgc
gatgatcgcgtattaaccggcgcgactgccgagaagtatcaagcgattcgtgaaaagcaa
attgatactcgtcgcaacaaaggcttgttgctgaataatagcgacattccagtcttgccc
gaatgggaagaacagattgaacgctatcgccaatcactacctgcagaagccgattccact
gaggctacaggggagtga

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