Cellvibrio sp. KY-YJ-3: D0B88_03125
Help
Entry
D0B88_03125 CDS
T06234
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek03030
DNA replication
cek03410
Base excision repair
cek03420
Nucleotide excision repair
cek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0B88_03125
03410 Base excision repair
D0B88_03125
03420 Nucleotide excision repair
D0B88_03125
03440 Homologous recombination
D0B88_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cek03032
]
D0B88_03125
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_03125
Enzymes [BR:
cek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0B88_03125
DNA replication proteins [BR:
cek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D0B88_03125
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D0B88_03125
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0B88_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QEY14238
LinkDB
All DBs
Position
complement(720965..723766)
Genome browser
AA seq
933 aa
AA seq
DB search
MTETLQNQPPLVLVDGSSYLYRAYHALPPLTNSKGQPTGAVKGVVNMMRRLVKDYPRSPI
AVVFDAKGKTFRDDMFAEYKANRPPMPDDLRPQVQPIHDIVQAMGLPLLVIEGVEADDVI
GTLARQATEQKRDVVISTGDKDMAQLVNEHVTLVNTMTETVLDIPGVNAKYGFGPELMID
YLALMGDKVDNIPGVPGVGEKTAQGLIQGMGGLDAIYADLEKVRSLSFRGAKTMPEKLLE
HRDMAYLSYRLATIKVDVELPLSPESIHLSAPDNQRLRELFEELEFKSWVKDLGESAIAQ
HATDQPGAANNLTLSNNDEEKIESVSAVAPQEIRYDIITDKNLFAEWLLRLQNASAFSFD
TETTALEIMDAKIVGVNFAIEAGIAAYVPCGHDYMGAPEQLPLEWVLEQLKPILEDANKI
KIGQNLKYDRSVLLNYNIELRGIKFDTMLESYVWNSIGSRHNMDDLAQNYLDYKTVTFEE
LAGKGVKQLSFNQLKIEDAGHYAAEDADITLRLHQFFWPQLEKIESLKNVFENIEMPLVP
VLSLIERNGALVDAKLLGKHSIELGERLTQLERKAFEIAGQEFNLSSPKQLGAILFEQQK
LPVIKKTPTGTPSTAEEVLQELALDYPLPKVLMEYRGLAKLKSTYTDKLPLVINPRTGRI
HTSYHQAVAATGRLSSQDPNLQNIPIKTEEGRRIRQAFIAPQGYKLVAADYSQIELRIMA
HLSDDAGLLSAFEKGLDVHRATAAEVFGVALDAVSPEMRRSAKAINFGLIYGMSAFGLAK
QLHLGRNEAQQYIDRYFERYPGVQRYMNNIRALAHEQGYVETLFGRRLYLPEINAKNKNL
QMGAERTAINAPMQGTAADIIKTAMIKVQAWLDETGLDAKIIMQVHDELVLEVAESQLDS
VRAGLIERMSAAASLKVPLLVEAGVGDNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagactctccaaaatcagccgcctctggtgcttgttgatggttcttcctacctc
tatcgcgcctatcacgccctgccaccactcaccaattccaaaggccagcccacgggtgcg
gtcaaaggggtggtaaatatgatgcgtcggttggtgaaggactacccgcgcagtcctatt
gccgtagtctttgatgccaaaggcaaaaccttccgcgacgacatgtttgccgaatacaaa
gccaatcgcccgcctatgcccgacgatttgcgcccgcaggtacaacccattcacgacata
gtgcaagccatggggttgccgctattagtaatagagggagtagaggccgacgatgtgatt
ggcaccctcgcgcgccaagccaccgaacaaaaacgcgatgtagtgatttccaccggcgat
aaagacatggcgcagctggtgaatgagcatgtcactttggtcaataccatgactgaaacg
gtattggatattcccggcgttaatgccaagtacggttttggtccggagttgatgattgat
tacctcgcgctcatgggcgacaaggttgacaatattcccggtgtgcccggggtgggtgaa
aaaaccgcgcaggggttaattcagggtatgggcggcttggatgcgatttatgctgacttg
gaaaaagtgcgcagcctgtcctttcgcggcgccaaaaccatgccggaaaaattgcttgag
catcgcgatatggcttatctgtcttatcgcttggccacgattaaagtggatgtggaattg
ccgctgagcccggaatctattcatctttcagcacccgataatcagcgcttgcgcgaatta
tttgaagagttggaatttaaaagttgggtaaaagatttaggtgaaagcgccatcgcgcaa
catgccacagaccaacctggcgccgcgaataatcttactctcagtaataatgatgaagaa
aaaattgaatccgttagtgctgttgctccgcaggaaattcgctacgacatcattactgat
aaaaatttatttgccgagtggttgctgcgcctgcaaaacgccagcgctttttcgtttgat
actgaaaccaccgcgctggaaattatggatgccaaaattgtcggggtgaattttgcgatt
gaagccggtatcgccgcctatgtgccctgtggtcacgactacatgggcgcacccgagcaa
ctgccgctggagtgggtgctggaacaattaaaacccattttggaagatgccaataaaata
aaaattggccagaatttaaaatacgatcgcagtgtgctgctcaattacaacatcgaattg
cgcggtattaaattcgataccatgctggaatcctatgtatggaactccataggcagtcgc
cacaatatggatgaccttgcacaaaattatttggattacaaaaccgtcacctttgaagag
ctggcgggcaaaggtgtaaaacagctcagctttaaccaattaaaaattgaggacgccgga
cactacgcggcggaagacgccgatatcactctgcgcttgcatcaatttttttggccgcag
ttagaaaaaattgaatcgctaaaaaatgtatttgaaaatattgaaatgccgctggtgcca
gtgttgtcgcttattgagcgcaacggcgcgttggtggatgccaagttgctcggcaaacac
agtattgaattaggtgagcgattaacacaacttgagcgcaaagcctttgagattgccggg
caagaatttaatttaagttcgcccaaacaattaggcgcgattttatttgaacaacagaag
ttgcccgttattaaaaaaacaccgacaggtacgccttcaactgcagaggaggtgttgcaa
gagttggcactggattatccgctgcccaaagtgttgatggagtatcgcggcctcgcaaaa
ttaaaatcgacctacaccgataaattgccgctggtgattaacccgcgcactggccgcata
cataccagctatcatcaagcggtagcggcaaccgggcgtttatcctcgcaagatcccaac
ctgcaaaatattccgattaaaacggaagaggggcgccgtattcgccaggcgtttatcgcc
ccccaaggttataaattggtagcggcggactactcgcaaattgaactgcgcattatggcg
cacttgtcggatgacgccggcctgctcagcgcctttgaaaaagggctggatgtacaccgt
gccaccgccgccgaagtatttggcgtggcgttggatgcggtcagcccggaaatgcgtcgc
agtgccaaggcgatcaactttggtttgatctacggcatgtcggcctttggtctcgccaaa
caactacatctcgggcgcaacgaagcacagcaatatatcgaccgctactttgagcgctac
ccgggtgtgcagcgctatatgaacaatatccgcgcgcttgcccatgagcagggttatgtg
gagaccttgtttggtcgtcgcctatatctgccggagatcaacgccaaaaacaaaaacctg
caaatgggcgccgagcgcaccgctattaatgcccccatgcagggtacggctgccgatatc
atcaaaaccgcgatgattaaggtgcaggcctggctggatgaaacgggattggatgccaaa
atcatcatgcaagtacacgatgaattggtactggaagtcgctgagtcacaactcgatagc
gtacgtgcagggttaattgaacgcatgtcggcggcagcgtcgctgaaggtgccgttactg
gtggaagcgggtgtgggcgataactgggatgaggcacattaa
DBGET
integrated database retrieval system
