Cellvibrio sp. KY-YJ-3: D0B88_03635
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Entry
D0B88_03635 CDS
T06234
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00040
Pentose and glucuronate interconversions
cek01100
Metabolic pathways
cek02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D0B88_03635
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0B88_03635
Enzymes [BR:
cek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D0B88_03635
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_6
CBM_35
Cadherin-like
SCPU
Motif
Other DBs
NCBI-ProteinID:
QEY11431
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Position
complement(837128..839236)
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AA seq
702 aa
AA seq
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MKNNIPVRSLGRYALFAAATSFLASAVQAQTLGDNLAITGPSAGADGSGFNDTKLVRDGN
VGTATQASGTSNQRVSVKWGSAVTFNTVILREAGSKVTSWSLVDNDTGTVWATGTGIGAE
RVVNLGTRSTKKINLIVNATSAPAMAEFEVYNASGTASSAPASSAAPSSVAASSTPASSA
PSSQTIVYQAESGSLSQAAVESNHSGFTGSGFVNFDNLVGSSAQWTVNQASAGTATITFR
YANGTTSNRAMSISVNGTVINSSLAFNGTGAWATWAEQSMTTQLNAGSNVIRAVSTTSDG
GPNLDQLSVTGGTVVVNSSSSQSSVAPSSVPASSVAPSSVPASSVAPSSSSVANTSSSAS
SNNGAIRPAKMEGFAAHAGVTGGAGGSVVTVSTGTELNAALCGRSTMSEPIVIRVNGTIN
HGNTTAQGCNTQADVIEIKAMSNISILGVGTNALFDEMGIHVRDASNIIIQNVHIRNVKK
SGSPTSNGGDAIGLETNVDRVWIDHNWLEASGGEKDGYDSLLDMKAGVTNVTVSYNLYND
SSRAGLIGSSDSDNKNTNITFHHNWYKNIEQRTPLIRHALVHMYNNYWSNDSIDHMFHAI
NSRMNAKALVESNYFYNVNNPLLASDDSDVAGCWQTNNDNTVLPYIYYSRTVGNGALVIP
EVVSGQLQSTCSVSVPYAVQMDAAANVPAIVMANAGVGKISP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaatatccctgtgcgctcactgggccgttacgccctgttcgcggcggcaacc
agttttctggccagtgccgttcaagcacaaacactcggtgacaaccttgccattactggc
cccagcgctggcgccgatggctccggctttaacgacaccaaactggtgcgcgacggcaat
gtcggcaccgccacccaagcttcaggtaccagcaaccagcgcgtgtcggtcaagtggggc
agtgcggtgacgtttaatacggtgatcctgcgtgaagcgggcagcaaagtgaccagctgg
agtttggtcgataacgacaccggcactgtgtgggcgacgggcaccggtatcggcgccgag
cgggtggtaaatttaggcacacgcagcaccaaaaaaatcaatttgattgtgaatgcgacc
agcgccccggcgatggccgaatttgaagtttataacgccagcggcacggcttcgtcggcg
ccagcttccagcgccgccccatccagtgttgccgcgtccagtacccccgcttcaagcgca
ccttccagccaaacgattgtgtaccaagctgaaagcggcagtttgtcgcaagcggcagtg
gagtccaaccacagcggttttaccggcagcggttttgtgaacttcgataatctggtgggt
agttccgcccagtggaccgtcaatcaagccagtgcgggcactgcgactatcaccttccgc
tatgccaatggcactaccagcaatcgcgctatgtcgatcagtgtcaacggcacggtgatc
aattcatcgctggcgtttaatggcaccggcgcctgggcaacttgggctgagcaaagcatg
acaacccagttgaatgccggcagcaatgtgattcgcgcggtatctaccaccagcgatggc
ggcccgaatctggatcagctgtcagtgactggtggaacagtggtggttaactcttccagc
agccagtcatcggttgcacctagcagtgtaccggcgtcgtccgttgcaccgagcagtgtg
cccgcttcatcggttgcgccaagcagcagctcggtggctaacacctccagcagtgcatcc
tctaacaatggggcgattcgcccggcgaaaatggaaggttttgctgcccatgccggtgta
actggcggtgccggaggtagcgtcgttaccgtgtcgacgggtacggaattgaatgcggcg
ctctgcggtcgcagcaccatgagtgaacctatagtgatccgggtcaatggcactatcaat
cacggcaataccactgcccagggctgtaatacccaggcggatgtgattgaaatcaaggcg
atgagcaacatctcgattctaggggtgggcaccaatgcgctgtttgatgaaatgggcatc
catgtgcgcgatgcttccaacatcatcatccaaaacgtgcatatccgtaatgtgaagaag
agcggttcacccacctccaacggcggtgatgctatcggcctggaaaccaatgtggatcgc
gtgtggatcgaccacaactggctggaagcgtcgggtggcgaaaaagacggttacgattcg
ctgttggatatgaaagccggggtgaccaacgtgacggtttcctacaacctctacaacgat
tccagccgtgcgggattaattggctcgagcgatagcgacaacaaaaataccaacatcacc
ttccatcacaactggtacaaaaacatcgaacagcgcaccccgctgatccgccacgcgtta
gtgcacatgtacaacaactactggtctaacgacagtatcgaccacatgttccatgccatt
aactcgcgtatgaacgccaaggcgctggtggagagcaactacttctacaacgtcaacaac
ccgctgctggcctccgacgattccgatgttgccggctgctggcaaaccaataacgacaat
acggtattgccctacatctactacagccgcacggtgggtaatggcgctttggttattccg
gaagtggtgagtggccaattgcaatccacttgctcggtgtcggtgccctacgcggtacaa
atggatgccgctgccaatgtaccggccatcgttatggccaatgccggggtaggaaaaatc
tcgccgtaa
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