Cellvibrio sp. KY-YJ-3: D0B88_04255
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Entry
D0B88_04255 CDS
T06234
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00040
Pentose and glucuronate interconversions
cek01100
Metabolic pathways
cek02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D0B88_04255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0B88_04255
Enzymes [BR:
cek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D0B88_04255
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QEY11550
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Position
complement(985887..987644)
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AA seq
585 aa
AA seq
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MKNITSGTAQRRVNFTRKLLVSTLGLLASGSVLAAATGGFSTTDGGNVSGAQSFNASTHT
QIQQIIENAKDGDYPVIITYTGNEDSLINQMIRDHTVDSSGNCPNPRWSEAYRKVEIKEF
TRGITIQGANGSSANFGIVVNKSSNVIVRNMKIGALAGASNDADMIRIDSGVNVWIDHNE
LFAVNNECKGSPDGDLTFESAIDIKKESQNITVSYNIIRDSKKVGLDGSSSTDIGGGRKI
TFHHNIYRNVGARLPLQRGGWTHMYNNLYDGITSSGINVRQNGYALIESNWFQNAVNPVT
CRFDSSNCGKWDLRNNNIRNPGDFATYNITWTSGGTIDATNWTTTAPFPISIPYSYSPVT
PQCVKDKIAQYAGVGKNGAQLTASACSGGTTSSVSSSTPSSTASSSSSAAASGSINLSTS
VSGTSVNLSWSTSNLTTASQEVYRDTDSNPSGRVRIASLAASARSYTDSTASAGTYYYWI
KNTTNGVVTNSNAAVATIGGTSSSSSSAASGAPVLSGTGDYPSGFSKCADLGGTCSVTSG
DGWVAFGRKGNWVLKKVSVPGSIACTVSAFGSDPLGNPNKCSYKR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcacttctggcaccgctcaacgccgtgtcaattttacccgcaagctactg
gtcagcaccctgggtttactcgccagcggctcagtgttggcggctgctaccggcggtttt
tccactaccgatggcggcaatgtgtcgggcgcccagtcttttaacgcctccacccacacc
caaatccagcagattattgaaaatgcaaaagacggcgactacccggtcatcatcacttac
accggtaatgaggattcgctgatcaatcaaatgattcgcgaccacactgtggactcctca
ggcaattgccccaacccgcgctggagtgaggcctaccgcaaagtggaaattaaagaattc
acccgtggtattaccatccaaggcgccaacggctcctcggcaaacttcggcatagtggta
aataaatccagcaatgtgattgtgcgcaatatgaaaattggcgcactcgccggtgcatcc
aacgatgccgatatgattcgtatcgacagcggtgtcaacgtgtggatcgatcacaacgaa
ttatttgcggttaacaacgaatgtaaaggttcaccggatggcgacctgacctttgaaagt
gcgattgatattaaaaaggaatcgcaaaacattacggtgtcctacaacattatccgcgac
agtaaaaaagtcgggctggatggttccagcagcaccgatatcggcggcggtcgcaaaatc
accttccaccacaacatctatcgcaacgtcggcgcgcgcctgccgctgcagcgcggtggt
tggacgcacatgtacaacaacctctatgacggcatcaccagttcgggcattaacgtacgc
caaaatggctatgcgttgattgagagcaactggttccaaaacgcggtaaaccccgtgacc
tgccgttttgatagcagcaactgcggcaagtgggatttgcgcaacaacaacatccgcaac
cccggtgattttgcgacttacaacatcacctggaccagcggcggcaccatcgacgccacc
aactggaccactaccgcccccttcccgattagcattccctacagctattcgcccgttacc
ccccagtgcgtaaaagacaaaatcgcccaatacgccggtgtgggtaaaaacggcgcgcag
ttgaccgccagtgcatgcagtggcggcaccacgtcatcggtgtcgtcgtcaacaccatcc
agcacggcgagcagctccagcagcgccgccgcatcgggttctatcaatctctcaaccagc
gtttcaggcaccagcgttaacctgagttggtcaaccagcaacctcactaccgcgtcacaa
gaggtgtatcgcgataccgactccaaccccagcggccgtgtacgtatagcgtcactagcc
gccagcgcacgcagctataccgacagcaccgccagtgcaggtacttactattactggatc
aaaaacaccaccaacggcgtagtcactaactccaatgcggcagtggcgactattggtggc
accagcagctccagctcatcagcagctagcggtgcaccggtattaagtggcacaggtgat
tacccaagtggcttctccaaatgtgctgatctgggcggcacctgctccgtcacctccggc
gacggctgggtagcttttggtcgcaaaggcaactgggtactgaagaaagtctcggtaccc
ggctccatcgcctgcaccgtatccgcatttggttcagatccactgggcaaccccaacaag
tgctcttacaaacgctaa
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