Cellvibrio sp. KY-YJ-3: D0B88_04340
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Entry
D0B88_04340 CDS
T06234
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_04340 (vsr)
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
D0B88_04340 (vsr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QEY11565
LinkDB
All DBs
Position
complement(1010449..1010904)
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AA seq
151 aa
AA seq
DB search
MVDITTPEKRSSMMSGIKSKNTRSELLIRKGLHRMGFRYQLHRKDLPGKPDLVFPKHHSV
VFINGCFWHAHGCHIFKWPSTRVEFWKEKIGANKIRDERNIQACITMGWKVLVIWECALK
GKFHRNPNEVIHTTANWLLYDSQSAEIKGKM
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggtagatataacaaccccagaaaagcgctcttcaatgatgtcgggtataaaaagcaaa
aatactcgtagtgagctgctaattcgcaagggattgcacaggatgggctttcgttatcaa
ttgcacagaaaagacttaccaggaaaacccgacctcgttttcccaaaacatcattcggtt
gtttttataaatggctgcttctggcacgcacacggttgccacatattcaaatggccatca
acccgcgttgagttttggaaagaaaagataggtgcaaataaaatccgcgatgagcgaaat
attcaggcttgtattacgatggggtggaaggttttggtgatttgggaatgtgctttgaaa
ggaaaatttcatcgcaaccctaacgaagttattcataccaccgccaactggcttctatac
gattctcaatcagcagaaattaaaggaaagatgtga
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