Cellvibrio sp. KY-YJ-3: D0B88_05820
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Entry
D0B88_05820 CDS
T06234
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00300
Lysine biosynthesis
cek00470
D-Amino acid metabolism
cek01100
Metabolic pathways
cek01110
Biosynthesis of secondary metabolites
cek01120
Microbial metabolism in diverse environments
cek01230
Biosynthesis of amino acids
Module
cek_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0B88_05820 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D0B88_05820 (lysA)
Enzymes [BR:
cek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D0B88_05820 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEY11831
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Position
1372121..1373383
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AA seq
420 aa
AA seq
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MQHFTERNGELYVEDTPLSAVAERFGTPCYVYSRAAFTQQYLAYAQALGSHPGMICYAIK
ANSNLAVLNMLAKLGAGFDIVSGGELERVLRAGGQPSRIVFSGVGKSADEIARALDVGIF
CFNVESEAELELLAQIAAEKGKIANVSLRVNPDVDANTHPYISTGLKENKFGIAIERAPA
VYARAAQLPSLAIKGLDCHIGSQLTQLTPFLDALDRLLLLVDELAASGITISHLDLGGGL
GVTYRNETPPPVADYMAAIKTKLGDRKLSLMFEPGRSISANSGVLLTKVMFLKPTEHKNF
AVIDAAMNDNIRPSLYQAWQDIRPVKSRPVKPRVGDAKKWDLVGPICETGDFLGKDRELA
IEAGDLLAVMSTGAYGFSMSSNYNTRGRAAEVVVDGDQIHLARARETFEDMIRGEALLPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatttcactgaacgcaatggcgaactctacgttgaagacactccactgagcgct
gttgccgaacgctttggcaccccctgttatgtttacagccgcgccgcttttacccagcaa
tatttagcttacgcgcaagcattgggttcgcacccgggcatgatttgttatgcgattaaa
gcgaattccaatctcgcggttttaaatatgctcgccaaactcggcgccggttttgacata
gtatccggtggtgaattggaacgtgtattgcgcgccggcggccagccatcgcgcattgtg
ttttccggcgtgggtaaaagtgccgatgaaatcgcgcgcgcgttggatgtaggtattttc
tgcttcaatgttgaatccgaagcggagctggaattgctggcgcaaatcgccgccgagaag
ggcaaaatagccaacgtctcgctgcgcgtaaacccggatgtggatgccaatacccacccg
tatatttccaccgggttgaaagaaaataaattcggtatcgccattgagcgcgctcccgcg
gtttatgcacgcgcggcacagttgcccagtttggcgattaaaggtttggattgtcacata
ggttcacagctcacccagctcacaccgtttttggatgcgctcgaccgtttgttattgttg
gtcgatgagcttgctgccagcggcatcactatttcgcatttggatttaggtggcggtttg
ggcgtgacttatcgcaatgaaaccccaccaccggtggcggactacatggcggcgatcaaa
accaaattgggcgatcgtaaattgtccttaatgtttgaacccggccgttccatttctgcc
aactccggtgtgctcttgaccaaggtgatgtttttaaaacccaccgagcacaaaaatttc
gcggtgattgacgcagcgatgaacgacaatattcgtccgtccttgtatcaggcatggcaa
gacattcgtccggtgaagagtcgtccggtaaaaccgcgtgtgggcgacgcgaaaaaatgg
gatttggtgggtccaatttgtgagacgggtgatttcctcggtaaagatcgcgagctggca
attgaagccggtgatttactggcggtaatgtccactggcgcctatggtttcagcatgagc
tctaattacaacactcgcggtcgcgcagcagaggtggtagtggatggcgatcaaatccat
ttggcgcgtgcgcgcgaaacctttgaagatatgattcgcggcgaagcccttttgcctgag
taa
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