Cellvibrio sp. KY-YJ-3: D0B88_06350
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Entry
D0B88_06350 CDS
T06234
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0B88_06350 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cek03019
]
D0B88_06350 (pcnB)
Enzymes [BR:
cek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
D0B88_06350 (pcnB)
Messenger RNA biogenesis [BR:
cek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D0B88_06350 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QEY11928
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All DBs
Position
complement(1496926..1498305)
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AA seq
459 aa
AA seq
DB search
MLKRLLNLFTSGTKDSAKASISRNSDGAAIIPRNQHTISRKNISSAAIKIIKQLEDAGFA
AYLVGGGVRDLLLGGHPKDFDVATNATPDEVKRIFRSARIVGRRFQIVHVRMGREVIEVT
TFRGHHDDSSQHAARSEDGMLLRDNVYGTLETDAMRRDFTVNALYYTLKDFSVIDYCDGM
SDLKTRTLRMIGDPATRYKEDPVRILRALRFAAKLGFTLEPNTAKPIRELGGLLLNVSDA
RLFEEVLKLFLNGSATATFALMRDYDLLVHLLPGTDKALKAGDEVGANLIEQCMINTDKR
VRSGKTVTPAFIYAALLWPALQQQFKVLSSQMPHTQAWSQAAQNTVNLQLTRTAIPKRFL
IPMREIWDLQQRLPSRLGMRALRTLDHPRFRAAYDFLLMREAAGEALDGLGVWWTNYQTA
NDEEREEMVKNLAKQSPKSASKPRRRRPRKPAAAPGGNE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacgcttgctaaacctcttcacctccggcaccaaggattccgccaaggcatcc
atttcgcgcaacagcgatggcgccgcaataattccccgcaaccaacatacgatctcgcgc
aagaacattagttctgccgccatcaaaattatcaaacaattggaagatgccggttttgct
gcctatctggtgggcggcggtgtacgcgacttgttgctgggcggtcacccgaaagatttt
gacgtggccactaacgccacccccgatgaagtcaaacgtattttccgcagcgcgcgcatt
gttggtcgccgcttccagattgtgcatgtgcgtatggggcgcgaagtcatcgaggtaact
acctttcgcggccatcacgacgacagctcccaacatgccgcccgcagcgaagatggcatg
ctgctgcgcgataatgtgtacggtacacttgaaaccgatgcaatgcgccgcgactttacg
gtcaacgccctctattacaccttgaaagatttctcggttatcgattactgcgatggaatg
agcgacctcaaaacccgcaccctgcgcatgattggtgacccggccacccgctacaaagaa
gacccggtgcgcatactgcgcgcgctgcgttttgccgccaaactcggttttacgttggag
cccaataccgccaaacccatccgcgaactgggcggcttattactcaatgtgtccgatgca
cgcctgtttgaggaggtactcaaactattcctcaatggctcggccacagccacttttgca
ctgatgcgcgattatgatttgctggtccacctgctcccaggtaccgacaaggcactcaag
gctggcgatgaagttggcgctaacctgattgaacagtgcatgattaatactgacaaacgt
gtccgcagcggcaaaaccgtcactcccgcgtttatttatgccgcgttactctggcccgca
ctgcaacaacagttcaaggtattgagcagtcagatgccgcatacccaggcatggtcacaa
gcggcacaaaatacggtgaacctgcaattgacccgcaccgctatccccaaacgctttctg
attccgatgcgtgaaatttgggatttgcaacagcgcctgcccagccgtctgggaatgcgc
gccctgcgcacactggatcatccccgctttcgcgcggcttacgacttcttgttaatgcgc
gaagccgctggtgaagcgctggatggcttgggggtatggtggaccaattaccaaaccgcc
aacgacgaagaacgcgaagagatggtgaaaaacctggccaaacaaagcccaaaaagtgcg
agcaaaccgcgccgtcgccgcccacgcaaaccggccgccgcccccggcgggaacgaataa
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