Cellvibrio sp. KY-YJ-3: D0B88_06585
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Entry
D0B88_06585 CDS
T06234
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cek03016
]
D0B88_06585 (truB)
Enzymes [BR:
cek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D0B88_06585 (truB)
Transfer RNA biogenesis [BR:
cek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0B88_06585 (truB)
Prokaryotic type
D0B88_06585 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QEY11969
LinkDB
All DBs
Position
1548719..1549708
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AA seq
329 aa
AA seq
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MARRKGRPVDGVLLLHKPAGMTSNHALQRAKRLFFVEKAGHTGALDPLATGVLPLCFGEA
TKFSQFLLDADKGYRTCIRLGATTDTCDADGEILEQKSTAGITRPQVEAALKPLIGDILQ
VPPMYSALKLNGQPLYKMARQGVEVERAPRPVTIHSIDILAFRAGEEAEVELDIRCTKGT
YIRSIAVDLGEALGCGGHVKTLHRSAAGLFNEDQCVTLEELQARFDEEQAASGDEAAYAA
LDSYLLSADAPVASLPAVDLPANSAHYFRMGNPVMVSKVYRFGEQGAIVRVFCAETEQSP
RAFLGLGSITDEGGVAPKRILANRSSNET
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtagaaaaggccgtccagtcgatggcgtattgttgttgcacaaaccggcaggc
atgacttccaaccatgccttgcagcgcgccaagcgtttgtttttcgtagagaaagccggt
cataccggtgcgcttgacccgcttgctaccggtgttttgcctctgtgttttggtgaggcg
accaagttttcgcaatttttgctcgatgctgataaaggctatcgcacctgtattcgcctg
ggcgcgactaccgatacctgcgatgccgacggtgaaatcctcgaacaaaaatccacagca
gggattacacgtccgcaagttgaggcggcgctcaaaccgctgattggcgatatcttgcaa
gtcccacccatgtattccgcattgaagctcaatggccagccgctttataagatggcgcgt
cagggggttgaagtcgagcgtgccccgcgtccggtcacgattcacagcattgatattctt
gcttttcgcgcgggtgaagaggccgaagttgagctggatatccgctgtaccaagggcacc
tatattcgctccattgcggtggatctcggtgaagctttgggctgcggtggccatgtcaaa
accctgcatcgctcggccgcaggtctatttaatgaagatcagtgtgtaacattggaagaa
ttgcaggctcgcttcgatgaagagcaggcagcaagtggtgatgaagctgcttatgccgcg
cttgatagctacttgctcagcgccgatgcacccgtcgccagcttgcccgccgtagactta
cccgccaatagcgcccattacttccgtatgggcaacccggtcatggtgtccaaggtctat
cgatttggcgagcaaggtgctattgtgcgcgtcttttgtgcagaaaccgaacaatcgccg
cgcgcgtttctcggtttaggcagtatcaccgatgaaggtggtgtagcccctaaacgaatt
ttggccaaccgctcatccaacgaaacctag
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