Cellvibrio sp. KY-YJ-3: D0B88_09390
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Entry
D0B88_09390 CDS
T06234
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0B88_09390 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_09390 (ruvB)
Enzymes [BR:
cek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0B88_09390 (ruvB)
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0B88_09390 (ruvB)
RecFOR pathway proteins
D0B88_09390 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_16
AAA_14
AAA_3
Mg_chelatase
TIP49
nSTAND3
AAA_17
AAA_2
RNA_helicase
ABC_tran
AAA_18
NTPase_1
Rad17
AAA_28
NB-ARC
AAA_24
RsgA_GTPase
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
QEY12442
LinkDB
All DBs
Position
2198875..2199900
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AA seq
341 aa
AA seq
DB search
MIETDRLIAPVAKEREDHLDRTVRPKSLTDYVGQPAVREQMEIFIGAAKKRGEALDHTLV
FGPPGLGKTTLANIIANEMNVSLKSTSGPVLEKAGDLAALLTNLEPGDVLFIDEIHRLSP
VVEEILYPAMEDFQLDIMIGEGPAARSIKLDLPQFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYNVADLTHIVARSSALLGVQMDIEGAAEVAKRSRGTPRIANRLLRRVRDFAEMKGDG
TVTAKMADSALNMLNVDERGFDHMDRRLLAAMMHNFDGGPVGVESLAAAISEDRGTIEDV
IEPYLIQQGFMARTPRGRILTNNAYLYFGVPVPKRLQDSAE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccgatcgcctgatagcccctgttgccaaagagcgcgaggatcacttggat
cgcacagtgcgccccaagtccttgacggattatgtggggcagcccgctgtgcgggagcag
atggaaatttttatcggcgccgcaaaaaaacgcggcgaggcattggatcacacactggta
tttggtccgcctggactaggtaaaaccacgcttgccaatattatcgccaacgagatgaat
gtctcgctcaaaagcacctccggcccagtgctggaaaaggcgggcgatttggcggcactg
cttaccaaccttgagccaggcgatgtgctgtttatcgatgagattcaccgtttgagtccg
gtggtggaagagatactctacccggcgatggaggatttccagctggatatcatgattggc
gaggggcctgccgcacgttcgattaaactggatttgccgcaatttacgctggtgggagcc
actacacgggcaggtttattgacctcacccttacgcgatcgttttggtattgttcagcgt
ttggagttttataatgtcgccgatttgacgcatatcgtggcgcgttcatctgcacttttg
ggtgtacaaatggatattgaaggtgcagccgaagtggctaaacgctcgcgtggaactcca
cgaattgcgaaccgattgttgcgccgcgtgcgcgattttgccgaaatgaagggcgatggg
actgtcactgcaaaaatggctgacagtgcactcaatatgctcaacgtggatgagcgtggt
ttcgaccatatggatcgtcgcttattggccgcaatgatgcacaattttgatggtggtcct
gttggtgtagaaagtcttgctgccgcaattagcgaggatcgcggaactatcgaggatgta
atagagccttaccttattcagcaggggtttatggcgcgcacaccgcgcggtcgtattttg
accaacaatgcttacctttattttggtgtgccggtacctaaacgattgcaagacagtgcg
gaataa
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