Cellvibrio sp. KY-YJ-3: D0B88_11855
Help
Entry
D0B88_11855 CDS
T06234
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek03030
DNA replication
cek03430
Mismatch repair
cek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0B88_11855
03430 Mismatch repair
D0B88_11855
03440 Homologous recombination
D0B88_11855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cek03032
]
D0B88_11855
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_11855
Enzymes [BR:
cek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0B88_11855
DNA replication proteins [BR:
cek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0B88_11855
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0B88_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QEY12886
LinkDB
All DBs
Position
2807084..2808499
Genome browser
AA seq
471 aa
AA seq
DB search
MLKYFPIPCAIVDIETTGGNVTYDRIIEIGIVEVTEQGVTHWSTLINPRTTIPEGIQRLT
GITNEMAAAAPYFEQVAKEIILRLQGKLFVAHNVRFDYGFIRNEFARLAYPYKSKLLCTV
RLSRFLYADCEGHSLEKLITRHNIRVSHRHRALDDAIAAYKFMEIAEQEKGEANIKAAIQ
HQYRKETMPAGFDASIMDGLPNSPGIYYFWGENQELLYIGKSISIRKRVLSHFTADHKSA
KEMKICQQTRNVTFEKTAGELSALILESKKVKALQPLYNRKLRRVSSFHTIQLEEGSGGI
LTPQIVPVSHMPTNGKKIYGLFPSKIKAKQTLQTLCDEHHLCYQVCGIENISNRACTSHQ
LKKCQGYCAGKQHALQHNVKLLEGLALLALKTWPYKGTVALVEKNQSDGMEQHLLINNWC
ILGVAETAADYETILADNPSLEIDKDIYRYLVTAIFKKRQSLALVPLLSGT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatatttccccataccctgtgcgatagtggatatagaaaccaccggtggcaat
gtgacctatgatcgcattattgaaatcggcatagtggaggtcacggagcagggcgttacg
cactggtctacattaattaacccacgcacgaccattcccgagggtattcagcggctaacc
ggaatcactaacgaaatggccgccgccgcgccgtactttgagcaagtcgccaaagaaata
atactgcgcctgcaaggtaagttatttgtcgctcacaacgtgcgttttgattatggtttt
attcgcaatgaatttgctcgccttgcgtatccctacaaatccaaactcttatgtacagtc
aggctgtcccgctttttgtatgcggattgcgaaggtcacagcctggaaaaacttatcact
cgccacaatattcgtgtaagccaccgccaccgcgcgctggatgacgccatcgcggcctat
aaatttatggagattgcagaacaggaaaaaggtgaggcgaatatcaaggccgctattcaa
catcagtaccgcaaagagactatgcccgccgggtttgatgcaagcattatggatggcctg
cctaactcacccggcatttattatttttggggtgagaatcaagagctgctctatatcggt
aaaagcatcagtattcgcaaacgtgtgctctcgcattttactgccgaccataaatccgcc
aaagagatgaaaatttgccagcaaacgcgcaacgtcacgtttgaaaaaaccgcaggtgaa
ttatctgcgctgattttggagtccaaaaaagtaaaagcactgcagccactgtacaaccgc
aaacttcgcagggtgagtagctttcacaccattcaattggaggagggtagcggcggcata
ctcacgccacaaatagttcctgtgtcccacatgccaaccaacggcaagaaaatctacggc
cttttcccttccaaaataaaagccaaacaaacccttcaaaccctctgcgacgaacatcat
ctttgctatcaagtctgcggtatagaaaatatcagcaatagggcttgtaccagtcatcaa
ctcaaaaaatgccaaggttattgcgcaggcaaacaacacgccttgcaacacaacgtcaaa
ttactggaaggcttggcacttttggcattaaaaacctggccctataaaggcaccgtcgca
ttggtagaaaaaaaccaaagcgacggcatggagcagcatctactaataaacaattggtgc
attctgggtgttgcagaaaccgccgcagactacgaaacgatacttgccgacaatccctcg
ctggaaatcgataaagatatttaccgttatctggtaaccgccatcttcaagaaacggcaa
tcgctggcattggtgcccttgctctcaggaacataa
DBGET
integrated database retrieval system
