KEGG   Cellvibrio sp. KY-YJ-3: D0B88_12040
Entry
D0B88_12040       CDS       T06234                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cek  Cellvibrio sp. KY-YJ-3
Pathway
cek00010  Glycolysis / Gluconeogenesis
cek00020  Citrate cycle (TCA cycle)
cek00260  Glycine, serine and threonine metabolism
cek00280  Valine, leucine and isoleucine degradation
cek00310  Lysine degradation
cek00380  Tryptophan metabolism
cek00620  Pyruvate metabolism
cek00630  Glyoxylate and dicarboxylate metabolism
cek00640  Propanoate metabolism
cek00670  One carbon pool by folate
cek00785  Lipoic acid metabolism
cek01100  Metabolic pathways
cek01110  Biosynthesis of secondary metabolites
cek01120  Microbial metabolism in diverse environments
cek01200  Carbon metabolism
cek01210  2-Oxocarboxylic acid metabolism
cek01240  Biosynthesis of cofactors
Module
cek_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cek_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cek_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cek_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cek00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    D0B88_12040 (lpdA)
   00020 Citrate cycle (TCA cycle)
    D0B88_12040 (lpdA)
   00620 Pyruvate metabolism
    D0B88_12040 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    D0B88_12040 (lpdA)
   00640 Propanoate metabolism
    D0B88_12040 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    D0B88_12040 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    D0B88_12040 (lpdA)
   00310 Lysine degradation
    D0B88_12040 (lpdA)
   00380 Tryptophan metabolism
    D0B88_12040 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    D0B88_12040 (lpdA)
   00670 One carbon pool by folate
    D0B88_12040 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cek04147]
    D0B88_12040 (lpdA)
Enzymes [BR:cek01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     D0B88_12040 (lpdA)
Exosome [BR:cek04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   D0B88_12040 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_binding_3 DAO FAD_oxidored HI0933_like NAD_binding_8 AlaDh_PNT_C 3HCDH_N Thi4 Lys_Orn_oxgnase Lycopene_cycl
Other DBs
NCBI-ProteinID: QEY12917
LinkDB
Position
2849191..2850630
AA seq 479 aa
MSEKFDVIVIGSGPAGYVAAIRAAQLGLKTACVEKWKNEEGKGVNGGTCLNVGCIPSKAL
LDSSYKYHEAKEDLGLHGITTSGVELNVSSMIARKNQIIKNLTGGIAGLFKSNGVTSLFG
TGKLLAGKKVEVTDFDGKVTIYDAENVILASGSSPINIPPAPVDNDVVVNSTGALEFTEV
PKRLGVIGAGVIGLELGSVWNRCGSKVTVLEALDSFLAIMDQQIAKETQKILTKQGLDIR
TSSRVTGSKVNGKEVTVTYLDKEGKEQQETFDKLIVCVGRRPFTENLLAADSGVNLDERG
FIFVNEQCETNAPGVWAIGDVVRGPMLAHKGSEEGVMVAERIAGQKSQINYDIIPNVIYT
HPEVASVGKTEEQVKASGEPYNVGTFPFAASGRAMAANETQGLVKIIAHAETDRILGCHI
VGPSAADLVQQVAIAMEFGSSAEDLGMMVFGHPTLSEAIHEAALAVHGHAIHIANKKKR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtctgaaaaatttgatgtgatagttatcggttctggccccgcgggctatgttgccgcc
atccgtgccgcgcaattgggtttgaaaactgcgtgtgttgagaagtggaaaaacgaagaa
ggcaagggcgttaacggcggtacttgcttgaacgtaggttgcatcccgtctaaagcatta
ctcgatagctcttacaaataccacgaagcaaaagaggatttaggccttcatggtattacc
acttcaggcgtagagttgaatgtttcttcgatgattgcacgtaaaaatcaaatcatcaaa
aatctgaccggcggtatcgcaggactgttcaagtctaacggtgttaccagcttgttcggt
actggtaaattgcttgctggcaaaaaagttgaagtgactgactttgatggcaaagtaacg
atatacgatgctgaaaacgtgattttagcctctggttccagtccaattaatattcccccg
gcacctgttgataacgatgtggttgttaactctactggcgcattggaatttactgaagta
ccaaagcgtttgggcgtaatcggcgctggtgtaattggtttggaactgggatctgtttgg
aatcgttgtggctccaaagttaccgtgctggaagcattggacagtttcctcgcaattatg
gatcaacaaattgccaaagaaactcaaaagatcctcaccaaacaaggtttggatatccgt
accagttcacgcgttaccggttcaaaagtaaacggcaaagaagtgaccgttacctatttg
gataaagaaggtaaagagcagcaagaaacgtttgataagttaattgtgtgcgttggtcgt
cgtccattcactgagaacctgttggctgctgatagcggtgtgaatctggatgaacgtggt
tttatttttgtaaacgaacaatgcgaaactaatgcaccaggtgtttgggcaattggtgac
gtagtgcgtggcccgatgttggctcacaaaggttcggaagaaggtgtgatggttgctgag
cgtattgcaggccaaaaatcacaaattaattacgacattattcctaacgtaatttacacc
cacccggaagttgcttcagtgggtaaaactgaagagcaagtgaaagcatcgggtgaacct
tacaacgtcggtactttcccgtttgcagcgtctggccgtgctatggcggctaatgaaact
caaggtttggtaaagattattgctcacgctgagactgatcgtatcctcggttgccacatt
gttggcccaagtgctgcagatctggttcaacaagtggcaattgcaatggagttcggttcg
agtgcagaagatttgggcatgatggtgtttggtcacccaaccctgtctgaagcaatccac
gaagcagccttggctgtgcatggtcatgccatccacatagccaacaagaagaagcgttaa

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