Cellvibrio sp. KY-YJ-3: D0B88_12395
Help
Entry
D0B88_12395 CDS
T06234
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00071
Fatty acid degradation
cek00280
Valine, leucine and isoleucine degradation
cek00310
Lysine degradation
cek00362
Benzoate degradation
cek00380
Tryptophan metabolism
cek00410
beta-Alanine metabolism
cek00640
Propanoate metabolism
cek00650
Butanoate metabolism
cek00907
Pinene, camphor and geraniol degradation
cek00930
Caprolactam degradation
cek01100
Metabolic pathways
cek01110
Biosynthesis of secondary metabolites
cek01120
Microbial metabolism in diverse environments
cek01200
Carbon metabolism
cek01212
Fatty acid metabolism
Module
cek_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D0B88_12395 (fadB)
00650 Butanoate metabolism
D0B88_12395 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
D0B88_12395 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D0B88_12395 (fadB)
00310 Lysine degradation
D0B88_12395 (fadB)
00380 Tryptophan metabolism
D0B88_12395 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D0B88_12395 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D0B88_12395 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D0B88_12395 (fadB)
00930 Caprolactam degradation
D0B88_12395 (fadB)
Enzymes [BR:
cek01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D0B88_12395 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D0B88_12395 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D0B88_12395 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D0B88_12395 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QEY12981
LinkDB
All DBs
Position
2923367..2925514
Genome browser
AA seq
715 aa
AA seq
DB search
MFQGKALKVSLLPDGIAELTFDLQGESVNKFNLLAVAELQQVLDLLEKAVDVKGLLITSA
KDVFIVGADITEFGAVFASGPDQVIGHLAANNRNFCRLEDLPFPSVVAINGFALGGGLEF
CLSCDYRIANTAAKVGLPETKLGIIPGWGGTVRLPRVAGLDTAVEWIAAGKENDAATALT
ARVIDAVVEPEKLRDAALNCLQQCMAGVFDYKARRTQKKSPLQLNFIESMMAFETSKAFV
GAQAGRNYPAPVTAIKCMQKAADKGRDEALQIEAEGFAKMALTPVAQSLVGIFINEQLLS
KKAKSWEKKADKKIGRAAVLGAGIMGGGIAYQSALKGVPIKMKDIAQKGIDLGLSEANKL
LSKRVERKKLTAAEMGDVLNRIEPALTYDGFDQIDIVVEAVVENPKVKKAVLAEAESKVG
VDTVIASNTSTISITYLAEGLARPENFCGMHFFNPVHMMPLVEVIRGAKTSDNAIARTVA
YANAMGKKPIVVKDCPGFLVNRVLFPYLAGFAMLVRDGVDFQRIDKLMETWGWPMGPAYL
LDVVGIDTAVHAEKVMADGFPDRMQRDFTSCTDALFAAGRLGQKSEKGFYNYALDKKGKP
AKVAAPEVSDILKSGIQSSMEISDEDIIARMMIPMATELTRCLDEGIVETAAEADMALVY
GTGFPPFRGGVFRWIDSIGAQTFCDMAAKFSALGALYQAPDSLKAKAANNQKFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaggaaaagccctcaaggtttcccttttgcccgatggcattgcggaattgacc
tttgatctgcaaggcgagtcagtcaataaatttaatttgctcgccgttgctgaacttcaa
caagtgctagatctgctggaaaaggccgttgatgttaaaggcctgctgataaccagtgcc
aaagatgtctttattgttggtgcggatatcaccgaatttggcgccgtgtttgcgtcgggg
cctgatcaggttatcggtcatcttgcagcaaataatcgcaatttttgccgtttggaggat
ttacccttcccaagtgttgtcgcaatcaatggttttgcattggggggcgggttggagttt
tgtttatcctgtgattaccgaattgccaataccgctgccaaagtaggcttgccggaaacc
aagctgggcattatccctggttggggtggcacggtgcgtttgccacgtgttgcagggttg
gataccgcggttgagtggatcgccgcgggtaaagaaaatgatgcggcaacggccttaaca
gcaagggtgattgatgctgtggtcgagccagaaaagttgcgcgatgcggcgctcaattgt
ctgcagcaatgcatggccggtgtatttgattacaaagctcgccgtacccagaaaaagtca
ccgctgcaattgaattttattgaatcaatgatggctttcgagacctcaaaagcatttgtt
ggcgcacaagccgggcgcaactatcctgcgccggtcaccgcgattaaatgtatgcaaaaa
gctgcggataaaggccgcgatgaggcattgcaaatcgaggcagaagggtttgccaaaatg
gctttaacccccgtagcgcaatccttggtgggtatttttatcaatgagcagttgctcagc
aagaaggccaaaagctgggagaaaaaagctgataaaaaaatcggccgtgcagcggttttg
ggggcggggattatgggcggtggtattgcctaccaatcagcgctgaaaggcgtgcctatt
aaaatgaaagacatcgcccaaaagggtattgatcttggtttgtcggaggcgaataaatta
ctgagcaagcgtgtggagcgtaaaaagctcactgctgctgaaatgggcgatgtgttaaac
cgcattgaacctgcattaacctatgacgggtttgatcaaattgatattgtggttgaggcc
gttgtagaaaacccgaaagtgaaaaaagcagtgttagccgaagcggaaagtaaagtaggg
gtcgacaccgttattgcttctaatacctcgaccatttccattacctaccttgctgaaggt
ttggcgcggccggaaaatttctgcggtatgcattttttcaaccctgtgcacatgatgccg
ctggttgaagttattcgcggcgcgaaaacctccgacaacgctatcgcgcgtacggttgcc
tatgccaatgccatgggtaaaaagcctattgtggttaaagattgccccggttttttagtt
aatcgcgtgttgttcccttatctggccggttttgcgatgttggtgcgggatggtgtggat
tttcagcgcatcgacaaattaatggaaacctggggttggccgatgggccctgcgtatttg
ctcgacgttgttggaatagatactgctgttcacgccgaaaaggtaatggctgatggtttt
cctgaccgtatgcagcgtgattttacctcttgcactgatgcactatttgcagctggtcgc
ctcggtcaaaaatcagaaaagggtttttataactacgcgctcgacaaaaaaggtaagccg
gcgaaagtagctgcacctgaagtgtcggatattctgaagtcaggtattcaaagttctatg
gagattagtgacgaagatattatcgcgcgcatgatgattccgatggcaactgagcttacc
cgctgcttggatgaaggcattgtggaaacggcggctgaggccgatatggcgttggtttat
ggcacaggtttcccgcctttccgcggtggcgtattccgttggattgattccattggcgcc
cagacattctgtgatatggcggcaaaattcagtgcgctcggtgcgctttatcaagcaccg
gatagccttaaagccaaagcggccaacaaccaaaaattttacggctaa
DBGET
integrated database retrieval system
