Cellvibrio sp. KY-YJ-3: D0B88_12720
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Entry
D0B88_12720 CDS
T06234
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cek03032
]
D0B88_12720 (ihfB)
03036 Chromosome and associated proteins [BR:
cek03036
]
D0B88_12720 (ihfB)
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_12720 (ihfB)
DNA replication proteins [BR:
cek03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D0B88_12720 (ihfB)
Chromosome and associated proteins [BR:
cek03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
D0B88_12720 (ihfB)
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
D0B88_12720 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
XPD_arch
Motif
Other DBs
NCBI-ProteinID:
QEY13041
LinkDB
All DBs
Position
2991547..2991837
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AA seq
96 aa
AA seq
DB search
MTKSELIEYITEKQNQLTIKDVEMSVKLLLDYMSDILASGERIEIRGFGSFSLHYRAPRT
GRNPKTGETVVLEGKYVPHFKPGKEMRDRVNESINR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaattgattgaatacattaccgaaaagcaaaatcagttgaccatcaaa
gatgttgaaatgtcggtaaagttattgcttgattacatgtcagatattctggcatcgggc
gagcgcatcgaaatccgtggttttggcagtttttcgctccattatcgagcccctagaaca
ggtcgtaatcctaaaactggtgagactgttgtgcttgaggggaagtatgtccctcatttc
aagcctggcaaagaaatgcgtgatcgcgttaacgagagcattaatagatag
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