Cellvibrio sp. KY-YJ-3: D0B88_14300
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Entry
D0B88_14300 CDS
T06234
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek03030
DNA replication
cek03430
Mismatch repair
cek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0B88_14300
03430 Mismatch repair
D0B88_14300
03440 Homologous recombination
D0B88_14300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cek03032
]
D0B88_14300
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_14300
Enzymes [BR:
cek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0B88_14300
DNA replication proteins [BR:
cek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0B88_14300
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0B88_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
AAA_18
AAA_14
AAA_19
AAA_30
nSTAND3
PIF1
TsaE
AAA_7
Rad17
AAA_assoc_2
AAA_28
zf-CXXC
Mg_chelatase
SKI
PET
RsgA_GTPase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QEY13312
LinkDB
All DBs
Position
complement(3367329..3369251)
Genome browser
AA seq
640 aa
AA seq
DB search
MSYQVLARKWRPRVFREMVGQEHVLQALINALDHNRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGVSSEPCGQCSSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRY
KVYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPMTILSRCLQFNLKNMNP
ERIVQHLKFVLNEELVPFEESALWHLGRAADGSMRDAMSLTDQAIAYGSGKITEAEVSTM
LGTIDQTAVYDVVNALASLDGRAVLAAVERMSEQAPDYASAIAEMLAVLHRIAIAQALPE
AVDNSHGDRERIMQLAQQLPSEDVQLFYQTALLGRRDLPLAPDPRAGFEMVLLRMLAFKP
QGVIEMPTQTLPQSTAPIKPSSTPQVAAPAVVAPVAAPAPVPTVSEAPPASVTPEPVAQG
GSVESEPPPAFEEAYGNAPEDDYVPASEDEYEPAPAYYEAPVAPEVNEPKKPEAAEQPPT
AVQQVTVPATQIAAAPEPVKVPTPKTLRKVPYEQAGPADWTEIYLGLGVTGILQSTVANC
QMVKRQGNEFFFVLDEANSTLYDVSHEKRLADLMGDYFVEPVRVHIQLGQVTAETPSMMA
IRLREERLQDAIHAIKNDPIVQQLIAQFGATLREETIQPI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttctggcgcgcaagtggcgcccgcgtgtgttccgggaaatggtcggg
caggagcatgtcctgcaggcacttattaatgcgctggatcataaccgcttgcaccacgct
tatctcttcactggtacccgcggtgtgggtaagaccaccatcgcgcggattctcgccaaa
tgcctcaattgtgaaaccggtgttagctctgagccctgcggccagtgttccagttgccgt
gaaatcgccgaggggcgttttgttgatttgattgaagtggatgcggcgtcgcgtaccaaa
gtggaagatacccgcgagctgctggagaacgtgcaatatgcgcctacccgcggccgttat
aaggtctacctgatcgacgaagttcatatgctctccaatagcagttttaatgcgctgcta
aaaaccctggaagagcctccaccccacgtaaagtttttgctggcgaccaccgacccacaa
aagctgccgatgacaattctgtcgcgctgtttgcaattcaaccttaaaaatatgaaccct
gagcgtatcgttcagcatttgaagtttgtattgaatgaagaattggtaccgtttgaagag
tcggcactctggcatttggggcgcgcggccgatggcagcatgcgcgatgcgatgagcctc
accgaccaagcgattgcctatggttccggcaaaattacggaagctgaagttagtaccatg
ctcggcaccatcgatcaaacagcggtgtacgatgtggtaaatgcactggcgtcgctggat
ggtagggcagtgttggctgctgttgagcggatgtctgaacaggcacctgattacgccagt
gcgattgctgagatgttagcagtactacatcgcattgcgattgcccaggcgctacctgaa
gcggttgataatagtcacggtgatcgcgagcggatcatgcagcttgcgcagcaattgccc
tcggaagacgtacagctgttttatcaaactgcattattgggacgccgcgatttaccgctt
gcccccgatccgcgcgccgggtttgagatggtgttgttgcgcatgctggcgtttaagccg
cagggcgttattgagatgccgacccagacattgccacaatcgactgcacccataaagcct
tcatcgactccacaggtcgcggctccggcagttgtcgctccggtggccgcgccggcccca
gttccgacggtaagcgaagctccccctgcgagtgttacacctgagcctgtagcccagggt
gggtcggttgagtctgagcctccgcctgcgtttgaggaggcttacggcaatgcccctgaa
gatgattatgttccggccagtgaagacgaatacgaacccgcacccgcgtattacgaagcg
cccgttgcgcccgaggtaaacgagccaaaaaagcctgaggcggctgagcagccgccaacg
gcagtgcagcaagttacagttcctgcgacacaaattgcagccgcgccggaacctgtgaag
gttcccacgccaaaaactctacgcaaagttccctatgaacaagcgggccctgcggattgg
acggaaatttatttaggcttgggtgttaccggtattttgcaaagtacggtggcgaattgc
caaatggttaaacgccagggcaatgaattcttttttgtgctggatgaagccaatagcacc
ctgtatgacgtgagccatgaaaagcgccttgccgatttaatgggtgattattttgtcgag
ccagtgcgcgtgcatatccagctggggcaagtgacggccgaaacaccgtcgatgatggcg
attcgtttgcgtgaggagcgtttacaagatgcaatccatgcgattaaaaatgatcctata
gtgcagcaactcatcgctcaatttggtgcgacattgcgcgaagaaaccattcaaccaatc
taa
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