Cellvibrio sp. KY-YJ-3: D0B88_15700
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Entry
D0B88_15700 CDS
T06234
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cek03036
]
D0B88_15700 (xerD)
Chromosome and associated proteins [BR:
cek03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D0B88_15700 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QEY13566
UniProt:
A0A5J6P019
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Position
complement(3666443..3667363)
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AA seq
306 aa
AA seq
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MSDGVKAEISGADTQLIAEYLDAIWMEKGLSGNTQESYRRDLEQFASWLSNVGADLVGVN
TMLVQQYLGERLQANLSSRTAARFLSCVRGFYRYLLRENKVAENPLTLIDNPKLSRSLPK
SLSEADVEALLAAPDLGDPVGLRDRTMLEVLYACGLRVSELVDLTMSQINLRQNVIRVLG
KGSKERLIPMGEEASAWLARYLREARPVLLNNVPDEIVFPSTRAQPMTRQTFWYRIKHWA
MMAGIQKDLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHIAKVRMKQQHA
EHHPRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatggagttaaagcagaaatatctggggcagatactcaattgatagcggagtat
ctagatgctatttggatggaaaaaggattgagtggcaatactcaggaatcgtaccgacgc
gatcttgagcaatttgcttcttggttatcaaacgtgggggctgatctggtcggtgtaaat
accatgttagtgcagcagtatttgggtgagcgcttacaggcgaatttatccagtcgtaca
gcggctcgttttctatcttgtgtgcgtgggttttatcgctatttgttgcgcgaaaataaa
gtggcagaaaatccattaacgcttattgataatcctaaattatcgcgttctttgccgaaa
tctttgagtgaagctgatgtcgaagcattgctggctgcgcctgaccttggtgaccctgtt
ggtctgcgcgaccgcactatgcttgaagtgctttatgcgtgtggtttgcgtgttagtgaa
ctggtagatttgaccatgtcacagattaaccttcgccaaaatgtgattagggtattgggt
aagggtagcaaggagcgattaatcccgatgggggaggaagcttctgcatggttggctcgc
tatttacgagaagcgcgacctgtgttactgaataatgtgcctgatgagatagtattccct
agtacgcgcgcgcagcctatgacgcgtcagaccttttggtatcgcatcaagcattgggcg
atgatggctggaattcaaaaagatttgtcccctcataccctgcgccatgcttttgcgaca
catttattgaatcacggggcggatttgcgtgtggtacagttgctgctcggtcatagtgat
ctatcaacgacccaaatttatacccatatcgcaaaggttcgtatgaagcagcagcatgct
gagcaccatccgcgcggttga
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