Cellvibrio sp. KY-YJ-3: D0B88_16315
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Entry
D0B88_16315 CDS
T06234
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Pathway
cek00260
Glycine, serine and threonine metabolism
cek00630
Glyoxylate and dicarboxylate metabolism
cek00670
One carbon pool by folate
cek00785
Lipoic acid metabolism
cek01100
Metabolic pathways
cek01110
Biosynthesis of secondary metabolites
cek01200
Carbon metabolism
Module
cek_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D0B88_16315 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D0B88_16315 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
D0B88_16315 (gcvP)
00670 One carbon pool by folate
D0B88_16315 (gcvP)
Enzymes [BR:
cek01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
D0B88_16315 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QEY13676
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All DBs
Position
3810937..3813846
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AA seq
969 aa
AA seq
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MSVDFRSAPLSALANHDEFVQRHIGPDAQQTAAMLATLGVSSVKELIDKTVPDNIRLKNE
LNLGDAVSEANALAQLKAIASKNKIFKNYIGMGYHDTHVPLVVLRNVLENPGWYTAYTPY
QPEIAQGRLEALLNYQQMIIDLTGMEMANASVLDEGTAAAEAMAMCKRQNKKSKSDVFFV
DADTHPQTIAVVKTRAEHFGFEVFVAKADELINGDYFGALLSYPGSSGQVRDLTALIETA
HNNNALVTVASDLMALMLLKSPGAMGADVVVGTSQRFGVPMGFGGPHAGFFAFRDAYKRS
APGRIIGVSIDARGKQALRMAMQTREQHIRREKANSNICTSQVLLAVMSVFYAIYHGPDG
LKRIANRIHRLTAIAAAALKAKGFGITNNQFFDTITVNVGDNQKAIYQAALNAEINLRLV
GSDSLGISLNETTSAADLEALLAVFGVTGIELTSFDEQVLAGKNITANNAIPADLLRSDA
VLSHPIFNTYHSETEMLRYLKRLESRDIALNNAMIPLGSCTMKLNATAEMIPVTWPEFGK
LHPFAPVDQAEGYKELFEELQEMLKACTGYDAISLQPNAGSQGEYAGLVAIKKYFESKGE
TQRDICLIPASAHGTNPASAQMVSYKVVVVACDNKGNVDLADLAEKIATYNNQIACIMVT
YPSTHGVFEEGITQLCDMVHAVGGQVYIDGANMNALVGVAAPGKFGGDVSHLNLHKTFCI
PHGGGGPGMGPIGVGKHLEPFLAAHPVQAVPGTDVNNGTISAAPWGSASILPISWMYIKM
MGAVGMRQATEFAMLNANYVAKKLEAAYPILYKGTNGFVAHECLLDLRPLKEASGISEED
IAKRLMDFGFHAPTMSFPVAGTLMIEPTESESKIELDKFIEAMLIIRNEIDQVINGEIAA
EASALHNAPHTQDDVLEENWTRAYSREVAGRPASWLKNHKVWPTVNRIDNVYGDRNLVCS
CPSIDSYME
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgattttcgttcagctccgctatccgctttggccaatcacgacgagtttgta
cagcgtcatatcggcccggatgcccaacaaactgccgctatgctggcaaccctgggcgtc
agctcagtcaaggagctgatcgacaaaacggtgccggacaatatccgcctgaaaaacgaa
ctcaatctgggcgatgcggtcagcgaagccaatgcactggcccaactcaaagccatcgcc
agtaagaacaagatcttcaaaaactacatcggcatgggctaccacgacacccacgtgcca
ctggtggttctgcgcaacgtattggaaaacccgggttggtacacggcttacacgccctac
caacccgaaatcgcccaaggccgtttggaggcattgctcaactaccagcaaatgatcatc
gacctgaccgggatggaaatggccaacgcttcggtattggatgaaggtaccgccgccgct
gaagccatggcgatgtgtaagcgtcaaaacaagaaaagtaaatccgacgtgttttttgtg
gatgcagatactcacccgcaaaccatcgctgtggtgaaaacccgcgccgaacatttcggt
tttgaagtttttgtcgccaaggccgatgaacttatcaatggcgactacttcggcgccctg
ctctcttacccaggctctagcggtcaggtacgcgatttaaccgcgctaattgaaaccgcc
cataacaacaatgcactggtaacagttgcatcggacttaatggcgttgatgctactcaaa
tctcccggcgctatgggcgccgatgtggtggtcggcaccagccaacgcttcggtgtgcct
atgggttttggcggcccgcacgccggcttcttcgctttccgcgatgcttacaaacgctcc
gctcccggccgcattattggtgtgtcaattgacgcgcgcggcaaacaagcactgcgtatg
gcgatgcaaacccgcgagcaacatatccgtcgcgaaaaagccaactccaatatttgtacc
tcgcaggtattgctcgcggtgatgagcgtgttctacgcgatttaccacggccccgacggc
ctgaaacgtatcgccaaccgcattcaccgcttgaccgcgattgctgcagctgcattaaaa
gccaaaggtttcggcattaccaacaaccagttcttcgacactattaccgtcaatgttggc
gacaatcaaaaagcgatttatcaagccgcattaaacgccgaaattaatttgcgtttggtg
ggcagcgattcattgggcatcagcctgaatgaaacaacgtctgctgctgatctggaggca
ttgcttgctgtatttggcgtaaccggaattgaactgacgtcatttgatgagcaagtgctt
gccggaaaaaatatcaccgccaacaacgcgatcccggccgatttgttgcgtagcgatgcg
gtattgtcccatccgatattcaatacctatcacagcgaaaccgaaatgctgcgctattta
aagcgcctggaatcaagagacatcgcgctcaataacgcgatgattccactcggctcttgc
accatgaaattaaatgcaactgccgagatgattcccgtcacctggccggaatttggcaag
ttgcatccctttgcgccggttgaccaagccgaaggctacaaagaattattcgaagagtta
caagagatgctcaaagcctgcaccggctacgatgccatcagcttgcaacctaacgctggc
tcacaaggcgagtacgccggccttgttgcgatcaaaaaatattttgaaagcaaaggtgaa
acccagcgcgatatttgtttgattcccgcgtctgcccacggcaccaatcccgcatcagca
caaatggtgagttacaaagtagtcgtagttgcctgtgataacaaaggcaacgtcgatctt
gctgacctcgcagagaaaatcgccacttacaataatcaaatcgcctgcatcatggtgact
tacccatccacgcacggtgtatttgaagaaggcattacgcaattgtgcgatatggttcat
gcagtaggcggccaggtctatatcgacggcgccaacatgaacgcactcgtcggcgttgcc
gcacccggtaaattcggtggcgatgtgtcgcatttgaatttgcacaaaactttctgtatt
ccacatggcggcggcggcccgggcatggggcccatcggcgttggcaaacatttggagccc
ttcctcgcggcgcatcccgtgcaagcagttccgggcaccgatgtaaacaacggcactatt
tctgctgcaccttggggttccgccagtatcctgccaatcagctggatgtacatcaaaatg
atgggcgctgtgggtatgcgccaggcgactgaatttgcgatgctgaatgcaaactacgta
gcgaaaaaattggaagccgcttatccgattttgtacaaaggcaccaacggttttgttgcg
cacgaatgcttattggatttgcgtcccttaaaagaagccagcggcatcagcgaagaagac
atcgccaaacgtttgatggacttcggtttccacgcgccaaccatgtcgttcccggttgcg
ggcacattgatgatcgaaccaaccgaatccgaatccaaaatcgaattggataaattcatc
gaagcgatgctgattatccgcaatgaaatcgatcaggtcatcaacggtgaaattgccgct
gaagccagtgccctgcacaatgcaccccatacccaggacgatgtactggaagaaaactgg
acacgcgcctactcacgtgaagttgccggccgccctgccagctggttgaaaaaccacaag
gtatggccaacggtaaaccgtatcgacaacgtgtatggggatcggaatttggtttgctca
tgcccgagtatcgacagctatatggagtaa
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