KEGG   Cellvibrio sp. KY-YJ-3: D0B88_16810
Entry
D0B88_16810       CDS       T06234                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
cek  Cellvibrio sp. KY-YJ-3
Pathway
cek03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cek00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    D0B88_16810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cek03019]
    D0B88_16810
   03009 Ribosome biogenesis [BR:cek03009]
    D0B88_16810
   03036 Chromosome and associated proteins [BR:cek03036]
    D0B88_16810
Enzymes [BR:cek01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     D0B88_16810
Messenger RNA biogenesis [BR:cek03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D0B88_16810
Ribosome biogenesis [BR:cek03009]
 Eukaryotic type
  90S particles
   RNase
    D0B88_16810
 Prokaryotic type
  rRNA processing factors
   D0B88_16810
Chromosome and associated proteins [BR:cek03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     D0B88_16810
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: QEY13765
LinkDB
Position
complement(3945962..3946642)
AA seq 226 aa
MLTLKYQRLEQRLGYSFKDQRQLQLALTHRSYGATNNERLEFLGDSILNFIIGEALFTRL
PEAREGQLSRLRSQIVKGDTLALLAREFELGDCLILGEGELKSGGKSRDSILADSVEAII
GAIYLESGLDLCRERVLTWFAPRLNELSANTSAKDSKSRLQEYLQSQRQPLPEYVVAEVG
GEGHAQVFTIECRVVLAKQPTRAIASNRREAEKQAAALMLAQLKIH
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgttaacacttaaataccaacgccttgaacaacgtctcggctactcttttaaagaccag
cgccagttacagctggcgctaacccatcgcagttacggcgctaccaataatgaacgcctt
gaattcctgggcgactccattctgaattttattattggtgaagctttatttacacgtttg
cccgaggcgcgtgaaggtcagttaagtcgcttgcgctcacaaattgtaaagggcgataca
cttgccttattggcgcgagagtttgagttgggtgattgcctgattttaggtgaaggtgaa
cttaagtccggtggcaagagccgcgattccattttggccgatagtgtagaagctattatt
ggtgcaatctatttggagagcggtctggatctttgccgcgagcgagtgctcacctggttt
gctccacggctcaatgagttgagcgcaaataccagcgctaaagactccaaatcccgtttg
caggaatatttgcagtcacagcgccaacccttgcctgaatacgtagttgctgaagtaggt
ggtgaaggacatgctcaggtgtttactattgaatgccgcgttgtgctcgctaaacaaccg
acccgcgctatagcatcaaaccgccgtgaagccgaaaaacaagcagctgcgttaatgtta
gcgcaattaaaaatccattga

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