Cellvibrio sp. KY-YJ-3: D0B88_17340
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Entry
D0B88_17340 CDS
T06234
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cek03400
]
D0B88_17340
DNA repair and recombination proteins [BR:
cek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
D0B88_17340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_10
AAA_22
ResIII
TrwB_AAD_bind
AAA_25
T2SSE
TFIIA
CbiA
FapA
Hydrolase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QEY13861
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Position
complement(4060563..4062125)
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AA seq
520 aa
AA seq
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MTQHYLIGGNGTQSVHLNLRMANRHGLIAGATGTGKTVSLQVLAEGFAKAGVPVFMADIK
GDLSGLAKAGKPHPKVDERVQLMNISDYQQRLFPCVFWDLYAKQGHPVRATISDFGPLLL
ANFFDLNETQTGVLYAAFKIADDQGMLLLDLKDLQAMLNWMKDERKNLEDEYGGLSEASI
AAIQRRLMMLEQEGADEFFGEPALDLNHLMQVTLEGTGVINILDATTLVNQPKLYAIFLL
WLISELFENLPEQGDADKPKLVFFFDEAHLLFDGAPKLLVDKIEQVVRLIRSKGVGIYFI
SQSPADIPDTVLGQLGNRIQHALRAYTPKDQQAVKIAAQTFRPNPAFSTEVVITELGIGE
ALVSVLDEKGSPTPVERVMVAPPASRIGPLTAEERAEVMARSPYKAIYSQLVDRESAYEI
LKQRVNQQAQIVQQEQLQAEQEKLNAQQRAEQERIAKEQQKQQERWQKEQLKAQQQAQRA
ESRRESATEALAKSAARAIGSNLGRQIVRGILGSLLGGRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacattatcttattggcggcaacggcacccagtcggtgcatttaaatctgcgt
atggcaaatcgccacggtttgattgccggtgccacgggcacgggcaaaacggtgagttta
caggtgctcgccgaaggttttgccaaggccggcgtgccggtatttatggcggatatcaag
ggcgacctctctggccttgccaaagcgggcaaacctcaccctaaagtggatgagcgagtg
cagctgatgaatatcagcgattaccagcagcggttatttccctgtgtattctgggatttg
tatgccaaacaaggccatccggtgcgcgccactatttctgattttggcccgctattgctc
gccaacttttttgatttgaatgaaacccaaaccggcgtgctctatgccgcgtttaaaatt
gccgatgaccaaggcatgttgttgctggatttaaaagatttacaagccatgctcaattgg
atgaaggatgagcgcaaaaatctggaagacgaatacggcggtttaagtgaggcaagcatt
gccgctattcagcgccgcttgatgatgttggaacaggagggggcggatgaattttttggt
gagccagcgctggaccttaatcacctgatgcaagtcactttggaaggcacgggtgtgatt
aatattctcgatgccaccaccttggttaatcagccaaaactttatgcaatttttttactt
tggttaatttccgaattatttgagaatttgcctgaacagggcgatgccgataaacccaaa
ctggtattcttttttgatgaagcacatttgttgttcgatggcgcacccaaattattggtg
gataaaatcgaacaagtggtgcgcttgattcgctccaaaggtgtagggatttattttatc
tcacaaagccctgcggatattcctgataccgtattagggcaattgggcaatcgtattcaa
catgcattgcgcgcctacactcctaaagatcagcaggcggtaaaaattgctgcgcaaact
tttcgccccaatccggcattttctaccgaggtggtaattactgaattgggtattggagaa
gcgctggtatcggtgttggatgaaaaaggctcgcccacaccggttgagcgggtgatggtt
gctccgccagcatcacgtattgggccgttaacagcagaggagcgtgcagaagtgatggcg
cgctccccttataaagccatttactcgcaactggtggatcgcgagtcggcgtatgaaatt
ttaaaacagcgcgttaaccagcaggcacagattgtgcagcaggagcagcttcaggcagag
caagaaaaattaaatgcacagcagcgcgccgaacaagaacgcatcgctaaagagcagcaa
aaacagcaagagcgctggcaaaaagaacagctaaaagcccagcagcaagcacagcgtgct
gagagccgacgtgaatcggccactgaagcgctggcaaaaagtgcggcgcgtgcaattggt
agtaatttgggccgtcaaattgtacgcgggattcttggttctctgttgggagggcgacgt
taa
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