Caenorhabditis elegans (nematode): CELE_C01G8.9
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Entry
CELE_C01G8.9 CDS
T00019
Symbol
let-526
Name
(RefSeq) ARID domain-containing protein
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_C01G8.9 (let-526)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_C01G8.9 (let-526)
03021 Transcription machinery [BR:
cel03021
]
CELE_C01G8.9 (let-526)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_C01G8.9 (let-526)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Helix-turn-helix
ARID
CELE_C01G8.9 (let-526)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CELE_C01G8.9 (let-526)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CELE_C01G8.9 (let-526)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
3565337
NCBI-ProteinID:
NP_001293325
WormBase:
WBGene00002717
UniProt:
X5M5M2
LinkDB
All DBs
Position
I:complement(<5300901..5317392)
Genome browser
AA seq
1741 aa
AA seq
DB search
MMMTSLSGRLYLDGRRDCLLGEDADKYAASVAEVAHGGGGPKKDDQVPPAPDASMPTPQQ
QQQQPNLPPPQQPYEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMPPMEWRPPGAEYQ
MPPGYPAGYPPYGMPPRHHPGYPHPAYGYPPPGAPYGYPPQMMRPPMMAPGDMVRMPPGP
TPTEWAAQQQAQAASRSVPPKEGPNGNPATPSSSSQPIPSPSASSIAEESLDDKPSGTKM
PAQPPPQQHPPPPQPQQIMSPMPPQAPPSQQATPSSSAASVAAPDTPKVSGKVLSKAELF
EKLVGPITLHNPMKVMAERRGFFERLIEFCEHNGEPLTMVPQVSKQSIDLHRLYIGVRAK
GGFQQVTKDKYWKNLCTEANPDLAESSAAGYQLRKHYQRHLLMLECRETGRNPEDEVAFA
DKMKRQRKREPAGGNAAAAAAVAAAQQGDQKSQHGAPGGSGAPPPGPPGAYPGNGAPGGP
PGGPPQFPGHPGMDPNYHYYQQHGMMPPHPGHPGYPPQHMNAFSPGQYPGHQRPPGGPGG
PPPGPQAMRAPMPQHMQEMDEHQRQWYAHQQAAAAHHHAQQQAAAQAQAAQAQQASTPAP
STTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVEPASVAGGSQAGS
RAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPSTSVPPPT
SVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAP
PPAGFHPSHPQHPQHAQYLAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPVPPGPP
QNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQPLSSTMPVVAPSTSTQ
PTPTTGSYLANTLATPGPAHAPSSSMSHAHHVISQQQHQYPPGCIEATATSQNQVKRRKV
YARELINATPRRLIMSLRSGLDAEAIWAINALNVLLYDDTNPHPTLQQMPGLVNVIVEHL
YATLSIMYPAEFQLTEPGKPIIMDESKETVEKMMKAEKDGGIKSIIEKMPVVPRKGSDKT
ATFTMMSRNGLQVHFRDESIPTALRKRFSRESGEKNSDAMVDHSISSAYVEDRNSVGLGG
GLAERIATRLRDKLLHEKTRPRPVFSKYLDDLETESTETIDTVEVKKEIEDEVAEEKKDV
LLMRGARPDELSDCKHEVELAWPRPTALSPKSQAMEELAHRALALSNILRGFSFVAGSDV
LMARNEALLFIIGRLLKLNVKEHKISSKRPGIVMSAEELKTAPKQLSADEKRAKEKSVLD
EVDATTAQMVETANQLRDDAFVMLTHMSVSLNLVDLPDAIAYPIYDGLLRWSVSRVPEAT
DSSIPCPVSPRDYSLEIMCKMVVIERNVDMFLSTGSWSRVEQFVHILTRLLTMNEETHYR
EFAIVILNALCIASEAVCYICAMETSAIAHLILFIDSADQNMHQVMQAHGMAALRDNPEL
MGTSVGMLRRAASMLRLLVKVPKAYKIYMKHQTRLLQFTMSQLMDSRVAGMIADTLYEIQ
EFVKEFGEDVPEPLKITYSEGYQPSQTDDKESTSTNSDAAAPPQKSTSSSPKPVEESAAT
TSVNVHGNGTLECETSSRPLSSEAAAAVITPYENHHKNEEEEDLKKEIDEGESCDGYDTE
AIRLSQKRSAAALIDEQSRSPPPAKRAHLSNGFDKSKSSVSTNGTLGDASQNDGALTTAV
A
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacgagtctctccggtcggctgtacttggatggcaggagagattgtttattg
ggcgaagatgctgataaatacgccgcttcggtagctgaagttgcacatggtggtggtgga
ccaaagaaagatgatcaagtaccccctgctcctgatgcttccatgcctactcctcaacag
cagcaacaacaaccaaatttacctccacctcaacaaccatatgagcatccagcgcagcaa
caccctccacagcatcatagtgtacctccgaacagttttgcaccaccaccgggacagcat
catccgcaacatcccggtatgccaccaatggaatggagacctccaggagcagaatatcaa
atgccaccaggttatccagcaggatatcctccgtacggaatgcctccacgacatcatcct
ggttatccacatcctgcatatggatacccgccgcctggtgctccatatggatatcctcct
caaatgatgaggccaccaatgatggctccaggagatatggtcagaatgccacctggtcca
acgccaacggaatgggccgctcagcaacaagcacaagcagcatcgcgtagtgtgccacca
aaagaaggtccgaacggaaatccagctacaccttcttcatcttctcagccgataccgtct
ccttcggcatcctcaattgctgaagaatcattagatgataagccaagtggtacaaaaatg
cctgctcagccaccaccacaacaacatccaccaccaccacagccacaacaaattatgtca
ccgatgcctccacaagctccaccatcgcaacaggcaacacctagttcgtcagcagcttct
gtggctgctcccgatacgccaaaagtgtctggaaaggttctgagcaaggcggagctgttt
gagaagcttgtcggaccgataactcttcacaatccgatgaaagtgatggcggagagaagg
ggatttttcgagcgactgatagagttctgcgagcataacggagagccccttactatggtt
ccacaagtttcaaaacaaagtatcgatcttcatcgactatacattggtgtcagagcgaaa
ggagggtttcagcaagttacaaaagacaaatattggaagaatttgtgcaccgaagcgaat
cctgatctcgctgaatcgtcagccgcaggatatcagcttagaaagcactatcaacggcat
ttactaatgctagaatgtcgagaaaccgggagaaatccggaggatgaggttgcttttgcg
gataaaatgaaacgacaaaggaaacgagaaccggccggtggaaacgctgcagctgcagca
gcagttgccgcggctcaacaaggagatcagaagtcgcaacatggagctccgggaggtagt
ggagcaccaccacctggaccaccaggagcttatccaggaaatggagcaccaggtggacca
ccaggagggccacctcagttccctggacatcctggaatggatccgaattatcactattac
cagcaacatggtatgatgccaccacatcctggtcatcctggatacccaccacaacatatg
aatgctttctcccctggtcaatatccaggacatcagaggcctccaggtggacctgggggt
cctccaccgggacctcaagctatgagagcaccaatgccacagcatatgcaagaaatggat
gaacatcaaagacagtggtatgctcatcaacaagccgctgccgcacatcatcatgctcag
caacaagctgctgctcaggctcaagctgctcaagctcaacaagcatctactccggctcca
tcaacgacaccagctcctcaggcagcatcttcgtcgcaagctgcaccaaccagtggcgcc
aatactcaaccagcaactccatcagcttcaaatcaaccaccgacgcctgcttctgcgtca
gcctcaacaacattgcacgtcgaaccagcatcagtcgccggaggaagtcaagcaggcagt
cgagctcccagtgctggccccggaccgagtgcaacaccggatagttcaactattccaagt
gcttctgctgctgctgatgctcaaacaacgacaagtagtgaaacatcaacacctggagaa
ccaacttctagtactccgtccgatacgcctgctccgtcgacaagtgtacctccaccaact
tctgtgcagccacctcaacctcaacagcctccacaaggaccgccaggaccaccaggacct
caacaacatccaggtccttatccaggatatcctggatatgggccaccgggtgctatgaga
ccaccagcagggtttgctccacccccaggagcaccgtacgggtatccgccaggagcacca
ccacctgctggattccatccgagtcatcctcaacatcctcaacatgcacaatatctcgca
tggcaacaacaacggtatcatcaacaacaacaacatcagcaacaacagcagcaaggagct
cctggaggaccacgaccaccatatccatatccaggtggaccagtgccaccaggtccccca
caaaatcgtatgccaccgccgccaccggctcagggagcaccgtctccatctggtgctgca
ggatccaatgggaagcaaccgagatatggaactccggctccaccgtctcgagcatcagcg
ccaactccgcaaccgctctcttctacaatgcccgttgttgcaccatctacatcaactcag
ccgactcccacgacaggaagttatcttgcgaacacgttggcgactccagggccagcacat
gcaccatcttcatcaatgtcccatgcgcatcacgtaatcagtcagcaacagcatcagtat
cctccaggatgcattgaagccactgcaacatcacagaatcaagtgaaacggcggaaagtt
tacgcacgagaactgatcaacgcgacaccacgacgattgattatgtcacttcgttcggga
cttgatgctgaagctatttgggcgataaatgctttaaatgtgttgctctatgatgataca
aatcctcatccaacacttcaacaaatgccaggactagttaatgttattgttgagcatctt
tacgcaacactttccattatgtatccggccgaatttcaacttaccgaacctggaaaaccg
attattatggatgagtcgaaagagactgtggaaaaaatgatgaaagccgaaaaagatgga
ggaattaaatcgattatcgagaaaatgcctgtggttccaaggaaaggcagtgataaaact
gcaactttcactatgatgtcaagaaatggtcttcaagtgcatttccgtgatgaatccatt
ccaactgctcttcgaaaacgattttctcgagaaagcggtgagaagaactctgatgcgatg
gttgatcattcgatcagttccgcttatgtagaagatcgaaattctgttggattaggaggt
ggactcgctgaacgaattgctacacgtcttcgagacaaacttcttcacgaaaagactcgt
ccacgacctgtcttctccaaatatttggatgatctcgaaacagaatcaacagaaacgatt
gatactgtggaggtgaagaaagaaattgaagatgaggtagctgaggagaaaaaggatgtt
cttctgatgcgtggagctcgtccagacgagttatctgattgtaagcatgaggttgagctc
gcgtggcccaggcccactgcactatcacctaaaagtcaagcaatggaagaacttgctcat
agagcacttgctctgtcgaatattctacgaggtttctcgtttgttgctggaagtgatgtt
ctgatggctagaaatgaggccctgttgtttattattggacggcttttaaagctaaatgtc
aaggagcacaagatttcatcaaagcgacctggaatagttatgagtgctgaagaattgaaa
actgcaccaaaacaactgtcagcagatgaaaaacgcgccaaggagaagtctgtactcgat
gaagtcgatgcaacgactgctcagatggtggaaacggcgaatcaattgagagatgatgca
ttcgtgatgcttactcatatgagtgtctcgttgaatcttgttgatttgcctgatgcgatt
gcatacccgatttatgatggattactgagatggtccgtgtcaagagttcccgaagcgaca
gactcgtcgattccatgtccggtgtcgccgagagattactcgttggaaattatgtgcaaa
atggttgtgattgaacgaaatgtcgacatgttcctctccacgggaagctggtcacgtgtc
gaacaatttgtgcatatactgacgagattgctcacaatgaatgaggaaactcattataga
gaattcgcaattgtgatactgaatgctctttgcatcgcttctgaagctgtatgttacata
tgtgcaatggaaacttctgccatagcccatctcattctattcatcgattcagccgatcag
aatatgcatcaagtaatgcaagctcatggaatggctgcccttcgtgacaatccagaactc
atgggaacatctgttggaatgctccgaagagcggcttcgatgctccgtttgttggtgaaa
gtgccgaaggcgtacaagatttacatgaaacatcaaactcgccttctacaattcacaatg
agccaattgatggattcccgagtggctggaatgattgccgacacactttacgaaattcaa
gaatttgtcaaagagtttggcgaagacgttccagaaccactgaaaatcacatattctgaa
ggatatcaaccgagccagacggacgacaaggaatcgacatctacaaactcggatgctgca
gcaccaccacaaaaatcgacgagttcttcgcccaagccagtcgaagaatcagcagcgaca
acttcggtaaatgttcacgggaatggtacattggaatgcgaaacaagtagtagaccattg
tcgtcagaagctgcagcggccgtcattactccatatgaaaatcatcataaaaatgaagaa
gaagaggatttgaaaaaggaaattgacgaaggggaatcgtgtgatggatatgatacagaa
gctattcgattatcgcaaaaacggtctgctgctgcacttattgatgagcaatcccgttct
ccgccaccagcgaaaagagcccatctttccaacggattcgataaatcaaaatcttcagtt
tcaacgaacggaacactgggtgatgcttctcaaaatgatggtgctctgacgacagccgtt
gcatga
DBGET
integrated database retrieval system