KEGG   Caenorhabditis elegans (nematode): CELE_C02B10.2
Entry
CELE_C02B10.2     CDS       T00019                                 
Symbol
snpn-1
Name
(RefSeq) SNAPIN protein homolog
  KO
K20002  SNARE-associated protein Snapin
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_C02B10.2 (snpn-1)
Membrane trafficking [BR:cel04131]
 SNARE
  SNARE associated proteins
   Others
    CELE_C02B10.2 (snpn-1)
 Endosome - Lysosome transport
  Arf GTPases and associated proteins
   BLOC-one-related complex (BORC)
    CELE_C02B10.2 (snpn-1)
  Others
   BLOC-1 complex
    CELE_C02B10.2 (snpn-1)
SSDB
Motif
Pfam: Snapin_Pallidin DUF7607 Mis12 MitMem_reg RsmF-B_ferredox Baculo_F T2SSF DUF489 4HB_MCP_1 FapA SieB
Other DBs
NCBI-GeneID: 177282
NCBI-ProteinID: NP_500721
WormBase: WBGene00015327
Ensembl: WBGene00015327
UniProt: O44445
LinkDB
Position
IV:complement(5090243..5091043)
AA seq 122 aa
MSSTAGGEVSINSGDLLLGTLSTSITKLEQQIRATQLSQKKLNSDCETMAEYLRDLSEYK
QPVDLLPYVGKLNDSTIRVNNTHQKLDDLLERLTKLQRQIARETYKKKNSIKEQEPPVQP
EN
NT seq 369 nt   +upstreamnt  +downstreamnt
atgtcgtcaactgctggaggcgaagtgtccattaattccggcgatcttctccttggaact
ctttccacttcgattacaaagcttgagcaacagattcgagcgactcagttgtctcaaaag
aaactaaattcagattgtgaaacaatggcagagtaccttcgagacctgagcgaatacaag
cagcctgtggacttgctcccctacgtcggaaaactaaatgattctacaattcgagtaaat
aatacacatcagaaactcgacgatctcctcgaacgtctcacaaaactccagcggcagatt
gctcgggaaacatataaaaagaagaactcaattaaagaacaagagccgccagttcagcca
gaaaactag

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