Caenorhabditis elegans (nematode): CELE_C04E6.11
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Entry
CELE_C04E6.11 CDS
T00019
Symbol
lrpr-1
Name
(RefSeq) Leucine Rich Pentatricopeptide Repeat homolog
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_C04E6.11 (lrpr-1)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
CELE_C04E6.11 (lrpr-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_long
HTH_23
Motif
Other DBs
NCBI-GeneID:
178978
NCBI-ProteinID:
NP_001412560
WormBase:
WBGene00015425
Ensembl:
WBGene00015425
LinkDB
All DBs
Position
V:complement(5914093..5917891)
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AA seq
996 aa
AA seq
DB search
MNNGVKFFHRNFLTLHRISRFSSKISQLSISAATTFPSIEIDSKLVRRGDFRGVVASKEK
NRASNPDVVLSRIQENLRKNYRISGDVILFDVVRQMESGNQNFIDHVVRSPERWIPMLIH
GCGHSLSNIETASKNEILERLWAQLQSKLAKVPVYAWNARFQVLNENEVDWDPLKELDNM
ERSGVEPTIETFHAVVKRISASGDVDGCKNMVYNMARKGFSVDAHINAASVFAFSIRGHY
LKADSLCEQASTKYGEEGSQLAHGAAVRAAACRGDNDRLRQVLRKSVIGSTKKLFLSSTD
ILETIWQMAEKSRDGKGAECSQLVEQMLNCTLRDSGFFRKLFREIERHICSRHYYTALSL
LEDTKRVSDCLENQRKNAFLHQLVGRLSTQLIRSHEPAHLIRDIANRVHFTFNNKYSKLK
IRMYDDLLFATLMLKDMDLDDRLRYFRSFVDEIDTRRERIHITLPLMTSEQNLDQRLAIL
YRLSTMGYRDWSSIENEPLVQIILQPLYNSGRPFRNQSKLDKLARILKSYGISERQVWMI
LHRWSKQKAKQEAPQPEEQWSRPYAKDLRGWCRAYYSETFESPKTTMNNSIPIPYEKLKS
CVDQGDITKVSSVLCSNGWPVDTDFGEIVPPVLNLYLMHESWKNVRSMLEEIAAFSGEWN
EDPSKSPMKNFHLLSVLRRMAEEEDTLSIRAITDYAYELRTLFPHATCYYEGFFETQTEY
KKLFVKCFERLERQGLTTSTVDELIDFLRCLVKLDLIQLHPSESLTVFFINILLKRLGWA
EALSTWQKFLSSLHCPNGTVALLRHCLQQNTDEARMNLQFVLHRGSTFLSQSRMSAMHFA
VLISMRKFEDAEKFCDQLSHKVDPNDCLMAMRLMNSLKARSVDDQFMLDFAALCLRKLGL
SDNKEVAQSMQADLLRICDTRHMGPTALRVYDLFSEYGVELREEEKNRLAAVIEKHSTLS
KKWIFKPNGFLNIAADDDIITNSEEARIQKKLKTMS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatggtgttaaatttttccatcgcaattttctcactttgcataggatttcgaga
tttagttcaaaaatatctcaattatcaatatcagcagcaacaacattcccatctatagaa
attgatagcaaattagtaagacgaggagattttcgaggagttgttgcatcgaaagaaaaa
aacagggccagtaatccggatgttgttctctcccgaattcaagaaaatctgcgaaaaaac
tatcgaataagtggagatgtgatccttttcgacgtggttcgacaaatggaatcaggaaat
caaaacttcattgatcatgttgtacgttctccggagcgctggattcccatgctgattcac
ggatgcggccattcgctctcaaatatcgaaacggcatcaaaaaatgagattctggaaagg
ctttgggcacaattacagagcaaactggcaaaagtacctgtatatgcttggaatgctcga
tttcaggttcttaatgaaaacgaagtcgattgggatccactgaaagaattggataatatg
gaacgaagtggcgtggaaccaacaattgagacatttcatgccgttgttaagagaatatct
gcttctggagatgttgatggatgcaaaaatatggtttataatatggctagaaaaggattc
tccgttgatgctcacataaatgcagcatccgtttttgctttttcaattagaggacattat
ttgaaagctgattccttgtgtgagcaggcttccacgaaatacggagaagaaggatctcag
ttggctcacggagcagcagtacgggcggccgcatgccgtggtgataatgatcgccttcga
caagttctacgaaaaagcgttattggatcaacaaaaaagttgttcctttcgtcgacagat
attttggagacaatttggcaaatggcggaaaaaagtagagatggaaagggagctgaatgt
tcgcaattagttgagcagatgctaaattgtacattgagagattctggattcttccgaaag
ttgttcagagaaattgaaaggcatatctgttctcgacattattatacagctttatcactg
ctagaagatacaaaacgggtatcggattgtctggaaaaccaacgaaaaaacgcattctta
caccagctagtcggacgcctttcaacccaattaattcgaagccacgaacccgctcatttg
attcgtgatatagctaatcgtgttcatttcacattcaacaataaatattcaaagctaaaa
attcgaatgtatgatgatcttctctttgccacactaatgctgaaagacatggatcttgat
gatcgcctgagatattttagaagttttgtggatgaaattgatacgagaagggaaagaatt
catataacactgccactaatgaccagcgaacaaaatctcgatcaacgactcgcaatactg
tatcgcctctccactatgggctatcgagattggtcttctatcgaaaatgaaccactggtg
caaatcattcttcagccactatacaatagcgggcgcccattcagaaaccaatcaaaattg
gataaacttgcacgaatcctgaaaagctatggaatttcagagcgtcaagtttggatgatt
ctgcatcgatggtctaaacagaaggcaaaacaagaagcacctcaacctgaagagcaatgg
tcacgtccttacgctaaagatttgagaggatggtgtagagcatactattcggagacattt
gaatcaccgaaaactacaatgaataactcaattcctattccttatgaaaaactgaaatcg
tgcgttgatcaaggcgacatcaccaaagtttcatcagtattgtgtagtaatggatggcca
gtggacactgattttggagagattgtaccaccagttctcaacctttatcttatgcatgaa
tcgtggaagaatgttcgatcaatgctggaagaaattgctgcattttctggagaatggaac
gaagatccatcgaaatctcccatgaaaaactttcatttgttgagtgttctgagaagaatg
gctgaagaagaagatactctgtcaattcgtgcaatcactgattatgcatatgagctccgt
actttgtttccacatgcaacatgctattatgaaggattttttgaaactcaaaccgagtat
aagaagctttttgtgaagtgcttcgaaagattggaacgacaaggattgaccacttctaca
gttgatgagctcattgatttcttgagatgcctagtaaaactagatctaattcaattacat
ccaagtgagagtctcacagtttttttcatcaacattcttctgaaacgtcttggatgggca
gaagcattgagcacgtggcaaaagtttctgtcaagtcttcattgtcccaatggtactgtc
gctttattacgacattgcttgcaacagaatacagatgaagctcgaatgaatttacagttt
gttcttcatcgtggctcaaccttcctgtcacaatctcgaatgagtgcaatgcacttcgct
gtgctaattagtatgaggaaatttgaagacgctgaaaaattctgtgatcaattatcccac
aaagttgatcccaatgattgcttgatggcgatgagattgatgaattcactgaaagctcga
tctgttgatgatcaattcatgctcgactttgctgctttatgtcttcgaaaactaggacta
tcagataataaagaagtcgcacagagcatgcaagcggatctacttagaatatgcgacact
cgccatatggggccaacagctctcagagtctatgatttattttccgaatatggtgtcgag
ttgcgagaagaagagaagaatcggctggcggcagtgattgaaaaacattcaacactttca
aaaaagtggatcttcaaaccaaacggatttctgaacatcgctgccgacgacgatatcatc
acaaatagcgaggaggcgagaattcagaagaaattgaagacgatgtcttga
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