Caenorhabditis elegans (nematode): CELE_C05D11.2
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Entry
CELE_C05D11.2 CDS
T00019
Symbol
vps-16
Name
(RefSeq) Vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04140
Autophagy - animal
cel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_C05D11.2 (vps-16)
04148 Efferocytosis
CELE_C05D11.2 (vps-16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_C05D11.2 (vps-16)
Membrane trafficking [BR:
cel04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CELE_C05D11.2 (vps-16)
Hops complex
CELE_C05D11.2 (vps-16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
175913
NCBI-ProteinID:
NP_498411
WormBase:
WBGene00006516
Ensembl:
WBGene00006516
UniProt:
Q11182
LinkDB
All DBs
Position
III:6433239..6436502
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AA seq
852 aa
AA seq
DB search
MGESHAPSKPKLDGELCLRPSSSVFLGDQQLYFTQEYLRTNSLNLKYVVYFTACQFSGPI
AVAYSPRPASWYIWIRTISGRILKRDMAFNEPVFMEWTRAHCLLVLNKAGRAHIFSSLGE
KISEVIFDSQMSDVHECRTFATSRGDSGIAVMDVDGQVSVVNSVSEPVIWSMKPPYSEMP
TAWTAFQPHSQLTHILLIFEAVFLMGCQGESLREQSHAASWVDSNTKYVKCVVDDARSRI
AMMTESGKIQIVSIDLSTCFCTVEITDHDIAKCINFGWVGNSAVFVQMSPSLIVFVNVSA
RRKPGDEVQIYEKMTANAKISIEPDGIRLFESTQVEFVEAASREKIAVLNRNPNEDGAHL
YKAAQEMSQGTGHNSFAASTVIQDLYKAIDDCISTACDTWQPEEQKLLLKAARFGMAYTN
TTPDTTKLMRAIKEIRVLNELRMVRTGIPLTHRQFRAIGETCVINRLIDMGSYSVAIKVA
QWLGGETSENVDRVLLEWVRRSISKVSKSNMKMDQPALEALDEKISAKLLQFPHVSIADA
ARRAIEAKLPELARLFIRRETDDANHVAVLLQLNDVSAALQKASASQRPQLIHQVVRHLM
NSESRSSYELAISRIPLAQCLYQDLVRQEGETRGASSRQMLALLEQASDFERQTLFHFDV
AETERNPDERLNALRRAKDAAKSMGDKAIEEILNDVSAFAPLQIQRGQADMSVRDTVIEM
AHDTAKVAQLKQQARLTDKQVLLWTIEGLAKKGKMEQLFDLAQKRSPIGYAPFVKACVRY
KRLDEIKKYFAKVNGYPDLVAAHLAMKNYVEAAKLAYDRRDRDVLHAVHMKSHEDPTQCP
RVGQFLRSLDQN
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtctcatgctccatcaaaaccaaaactagatggagagttgtgtcttcgtccg
agtagttcagtgtttttgggagatcaacagctgtatttcacacaagagtatctacgaaca
aactcgttaaatctcaaatatgtcgtttactttacggcttgccaattctcaggtccaatc
gctgtcgcatattctcctcgtccagcttcctggtacatttggatcagaaccatcagtgga
agaattttgaagcgagacatggcattcaatgaaccagtttttatggaatggactcgtgct
cattgccttttagttctgaataaagcaggaagagcccacatattttcttctctgggcgag
aaaatttccgaggttattttcgattcacaaatgtctgatgttcacgaatgccgcacattt
gccacgtcacgaggagacagtggtattgcggtaatggatgttgatggtcaggtttctgta
gtaaattctgtatcggagccggtgatttggagcatgaaacctccatactccgaaatgccg
acagcatggacagccttccagcctcattcacaacttacccacattctgctcattttcgaa
gctgtatttttgatgggatgccaaggagaatcactaagagaacaaagccacgcagcatct
tgggttgattcgaatacgaaatatgtgaagtgtgttgtggatgatgcgagaagtaggatt
gccatgatgacggagagtggaaaaatacaaattgtctccattgatctctctacatgcttc
tgcacagtggaaatcacggatcatgacatcgcaaaatgcatcaacttcggatgggttgga
aattcggctgtatttgttcaaatgtcaccatctcttattgtttttgttaatgttagtgca
cgacgtaagccaggagacgaagtccagatttatgagaaaatgactgcaaatgctaaaata
agtatagaaccagatggaattcggttgttcgagagtacccaagtggaatttgtcgaagca
gccagtcgagaaaagattgcagttttgaatcgaaatccaaacgaagatggtgctcatctg
tacaaagcagctcaggaaatgagtcaaggaaccggacacaattcttttgcagcatctaca
gtaatccaggatctctataaagctattgatgattgtatctccactgcatgtgacacgtgg
caacctgaagagcaaaagttgctactaaaagcggctcgattcggaatggcctacacaaac
acaacgccagatactacgaaattaatgagagctatcaaagaaatccgagtgctaaatgaa
ctaagaatggttcgcactggcatcccgctcactcatcgacaattcagggctattggagaa
acctgcgtgataaacagacttatcgacatgggatcctatagtgttgcaattaaagttgct
caatggctcggcggagaaacaagtgaaaatgtagatcgagtgctcttagaatgggtcaga
agatctattagtaaagtctcgaagagcaatatgaaaatggatcagccagcattagaagct
ttagatgaaaagatttctgcaaaattgcttcaatttcctcatgtttccattgccgatgcg
gctcgacgagcgattgaagcaaaacttccagaacttgcgaggctgttcattcgaagagag
acagatgatgcaaaccatgtggcagtcttactccaactcaacgatgtttcagctgcactc
cagaaagcatcggcttctcagagaccacagttaattcatcaggttgtacgtcatctaatg
aacagtgaaagtcgctcgagctatgagctcgcaatcagtcgaattccgcttgcccaatgt
ctataccaggatctcgttagacaagaaggtgaaactcgcggagcatcttcgagacaaatg
ttagcacttttggaacaagccagcgacttcgagagacaaactttattccattttgatgtt
gcagaaactgaaagaaatcccgatgaacgtttaaatgctctccgacgtgccaaggatgct
gcaaaaagtatgggtgacaaggcaatcgaagagattctgaatgacgtcagcgcatttgct
ccactacaaattcaacggggacaagcagacatgtcagtgagggatacggtaattgagatg
gcacacgacactgcaaaggttgcacagttgaaacagcaagcaagattgactgataaacaa
gttttgttatggacaatcgaaggattggctaaaaaaggaaaaatggagcagctgtttgat
ttggctcaaaaaagatctccaattggatatgctccattcgtcaaagcctgtgttcgatat
aaaagacttgacgagatcaagaagtattttgcaaaagttaatggatatccagatctggtg
gctgctcatcttgcaatgaaaaactacgtggaagctgccaagctggcctacgatcgccga
gaccgtgatgtcttgcacgcagttcacatgaaatctcacgaagatcccacacaatgtccg
agagtcggtcaatttctcagatcgctggaccagaactga
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