Caenorhabditis elegans (nematode): CELE_C12D8.11
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Entry
CELE_C12D8.11 CDS
T00019
Symbol
rop-1
Name
(RefSeq) RNA-binding protein RO60
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
cel
Caenorhabditis elegans (nematode)
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Gene cluster
GFIT
Motif
Pfam:
TROVE
vWA_Ro60
TSP_C
DUF7227
Motif
Other DBs
NCBI-GeneID:
179425
NCBI-ProteinID:
NP_505638
WormBase:
WBGene00004405
UniProt:
Q27274
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All DBs
Position
V:complement(10252838..10255055)
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AA seq
643 aa
AA seq
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MADELNEFQEAGNFNEEALMRLSNVCARLRRMQMLESDVEITVVDGELKRVPRQMEKVKD
GQVENNAGGFVFPVSDETQVRRFLILGSDKGSYHQSSEKITIDNAQRIIKIIEQGNGHMV
LKELALINAENRNPKMNAMIFTLAICARISTHDTTKKTECPMLNAYSDYIRALHDSALDL
IPEVCRTPTHLFEFVDYCQTISESTKAGGAKSSTGWGRSMRNAISKWYTTKTTEKLAMLL
TKYPQREGWSHRDLFRLAHPNLMDSRSHGQSEDRLEREQLFRFAVKGDLVKRKRKMSVEE
VAEVEKVWDKKALKLPYTEEQLIKEEQSRALNLVEAYLKLKNEQSEEVIVAAIKKHGLVR
EHLPTTSLNSKLVWETLFDVSMPMTAMIRNLAKMTVVGALDEKRVDNIVKRLTDQEELRR
SRIHPINLLTARAVYAQGRGDKGSLTWEPNQKICDALEAGFYKAFVNAPPTGKRYCLALD
VSGSMTSRVSSSPLSCREAATGMSLINLHNEAEVRCVAFCDKLTELPFTKDWKIGQVNDY
VNNLDFGRTDCGLPMTWATENNLKFDVFIIYTDNDTWAGEIHPFEAIKKYREASGIHDAK
VIVMAMQAYDYSIADPSDAGMLDITGFDSAVPQIVHEFVTGKI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagttgaatgaattccaagaggctggaaattttaacgaggaggcattgatg
agactctctaacgtctgcgcccgacttcgccgtatgcaaatgctggaatctgatgttgag
attactgttgtcgatggtgaactcaagagagttcctcgtcaaatggagaaagtcaaggat
ggtcaagtggagaataacgccggaggattcgtttttcctgtatctgatgaaactcaagtt
cgtcgcttcttgatcctcggttctgacaaaggaagctatcatcagtcgtctgaaaagatc
actatagacaacgctcaaagaatcatcaaaattattgagcagggtaacggacatatggtt
ttgaaagagctggcattgatcaatgctgaaaaccgtaatccaaagatgaacgcaatgatc
ttcacattggcaatttgtgctcgaatctctactcatgacacaacgaagaaaactgaatgt
ccaatgctcaatgcctactcagattatatccgagctcttcatgattcagcgctcgatctt
attccggaggtttgccgtacaccaacccatctcttcgaattcgttgattattgtcaaaca
atctctgaaagtactaaagcaggaggtgctaaatcttcaactggatggggtcgttcaatg
agaaacgccatcagcaaatggtataccacaaagacaactgaaaagttggcaatgttgctc
acaaaatacccacaacgtgagggatggtctcatcgcgatcttttccgacttgctcatccc
aatcttatggatagccgttctcatggccaaagcgaagatcgtcttgaaagagagcaattg
ttccgatttgcggtcaagggagatttagtgaaaagaaagagaaagatgtctgtcgaggaa
gttgctgaagttgagaaggtctgggataagaaagcgttgaagcttccgtacaccgaggaa
caattaattaaggaagaacagagcagagctctcaacctcgtggaagcgtacctcaagctc
aaaaacgaacaaagcgaggaagtcatcgtagcagctatcaagaaacatggacttgtccgt
gagcatctgccaactacaagtctcaattcaaaacttgtatgggaaacacttttcgatgtt
tcaatgccaatgactgctatgattagaaatcttgcaaaaatgaccgttgtgggcgccctt
gatgagaagagagttgacaatatcgtgaaacgtctcactgatcaagaggagctgcgtcgt
tctcgaattcatccaataaatcttctgactgcccgtgctgtctatgctcaaggtcgtggt
gacaagggaagtctcacttgggagccaaatcaaaagatttgtgacgcccttgaagctggc
ttctacaaggcattcgtgaatgcaccaccaactggaaaacgatactgcttggctctcgat
gtttctggtagcatgacctctcgtgtcagttcgtcaccactctcatgccgtgaagctgct
accggaatgtctttgatcaaccttcacaatgaagccgaagttagatgtgtcgccttctgt
gataagctcactgagcttccgtttactaaggattggaagatcggacaagttaatgactac
gttaacaaccttgatttcggcagaacagattgtggccttccaatgacttgggcaacagaa
aataatctcaagtttgatgtcttcattatctacaccgacaacgatacctgggctggagag
attcatccattcgaagccatcaaaaagtatcgtgaagcttctggtattcatgacgcgaag
gtcattgtgatggcaatgcaggcatatgactactcgattgccgatccatctgatgctggt
atgctcgacattaccggattcgattcggctgtaccacagattgttcacgagtttgttact
ggaaagatctaa
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